| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2452 |
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| Symbol | |
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| ID | 5090309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2936585 |
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| End bp | 2937937 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644741880 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001194798 |
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| Protein GI | 146300207 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.362946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACTT TCGAAAAATT CAATCTCCCA AAATCATTAC AAAAAGCAGT TGACGAATTA
GGGTTTGTTA CGCCTACTCC TATTCAGGAA AAATCTTTTT CTGTAATCAT GTCTGGACGC
GATATGATGG GAATTGCACA AACCGGAACC GGTAAAACTT TTGCTTATTT ACTGCCTCTT
TTAAAACTAT ATAAGTTTAC CCATACCAAT ACGCCAAAAA TCGTAGTGCT TGTACCAACC
CGCGAATTAG TAGTTCAGGT GGTTGAAGAA GTAGAAAAGC TGACCAAATA CATGTCAGTT
AAAACTTTAG GTATTTATGG CGGCGTAAAC ATCAATACAC AAAAAAAAGC CGTTTACGAA
GGTGTCGACA TTTTGGTTGG AACACCAGGA CGTACAATGG ATTTAGCGCT TGATGCTGTC
GTTCGTTTTG ACGAAACTCA AAAATTAGTT ATAGACGAGT TTGACGAAAT GTTGAATTTA
GGTTTCAGAC CACAGCTGAC TTCACTTTTT GCGATGATGA AAACCAAACG TCAAAACATT
CTGTTCTCGG CAACGATGAC AGATGAAGTT GATGATATCT TAAATGATTA TTTTGATTTC
CCGGAAGAAG TAACATTAGC ACCATCTGGA ACACCGCTTG AAAAAATTAC ACAGTTTACT
TATAATGTTC CAAACTTCAA TACAAAAGTA AATTTGCTGA AACATTTATT AGAAACCGAC
GAAAGCATGA ATCGTATTTT GGTTTTCGTA AACAACAAAA AGATTTCGGA TATGCTTTTC
AATCGTATTG ATGAGCTTTT TGAAGGTCAG TTTGGTGTTA TCCACTCTAA TAAATCTCAA
AATTACCGTT TGAGCACAAT GGCTGAATTT CAGGAAGGAA ACCTTCGCGG TTTAATTACA
ACCGACGTTA TGGCGAGAGG TTTGGATATT TCGAATATCA CTCACGTAAT TAACTTCGAA
CTTCCGGAAG AACCAGAATT GTATATGCAC AGAATTGGTC GTACAGGTCG TGCAGATGCA
ACTGGAACAG CTATTAGTTT TGTTACACCA AGAGAAGAAG AATTCAAAAT TGAAACTGAA
CTTTTAATGG ATCAGGAACT TAAAATTTCT GATTTTCCTG AAGAAGTAGA AATTTCTGAA
AAATTGATTG AAGCTGAAAA AGATAAACTG CCAAGAAAGT TTTTATTGAA AAAACCAAAA
CTTGAAGGTG ACGGTGCTTT TCACGAAAAA TCTAAGAAGA ATCAAAAAAT TAATCTGGGC
GGTCCTTCAA AAACCAAAAA GAAAACACAC GGATCAGTTA ATAGAAATAT GCTGAAAACG
AGAAATGAGA AGAAGAAAAA AAATAATAAG TAA
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| Protein sequence | MSTFEKFNLP KSLQKAVDEL GFVTPTPIQE KSFSVIMSGR DMMGIAQTGT GKTFAYLLPL
LKLYKFTHTN TPKIVVLVPT RELVVQVVEE VEKLTKYMSV KTLGIYGGVN INTQKKAVYE
GVDILVGTPG RTMDLALDAV VRFDETQKLV IDEFDEMLNL GFRPQLTSLF AMMKTKRQNI
LFSATMTDEV DDILNDYFDF PEEVTLAPSG TPLEKITQFT YNVPNFNTKV NLLKHLLETD
ESMNRILVFV NNKKISDMLF NRIDELFEGQ FGVIHSNKSQ NYRLSTMAEF QEGNLRGLIT
TDVMARGLDI SNITHVINFE LPEEPELYMH RIGRTGRADA TGTAISFVTP REEEFKIETE
LLMDQELKIS DFPEEVEISE KLIEAEKDKL PRKFLLKKPK LEGDGAFHEK SKKNQKINLG
GPSKTKKKTH GSVNRNMLKT RNEKKKKNNK
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