| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2435 |
|---|
| Symbol | |
|---|
| ID | 5090292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2920398 |
|---|
| End bp | 2921156 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644741863 |
|---|
| Product | glucan endo-1,3-beta-D-glucosidase |
|---|
| Protein accession | YP_001194781 |
|---|
| Protein GI | 146300190 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.744797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TAGTTTTACT GCTGTTAATC TGTAGTTTTT CGTATGCACA GGAAACAAAA
AGAAAATTAG TCTGGGAAGA AAATTTCAGT AAAAAAAATA TAAACGAAAA AGACTGGAAT
TTTGAACTTG GCGACGGCTG TCCAGATTTA TGTGGTTACG GAAATAATGA AAGACAGATT
TATACCAAAA CAAATCACGA AATAAAAGAT GGAAATTTAA TTATTGAAGC CAGGAAAGAA
GGAAATATAT ATACTTCGAC CAAAATTACT ACAAAAGGCA AAAAGGAGTT TAAATACGGC
AGAATTGAAG CAAGGGCAAA ACTGCCAATC GGACACGGTT TATGGCCGGC ATTTTGGATG
CTTGGAGCTA ATATTGATGA GGTAAAATGG CCAAAAACAG GTGAAATTGA TATCTTAGAA
TATATAGGCA GAGATCCTCA TATGGTTTAT ACAACCCTGC ATACGCAAGA CAGCCACGGA
AATACAATCA ATACAAAACG TACAGAATTT CCAAATATTG AAGAAGGTTA TCATGTATAT
GCCATTGAGT GGAACAAGGA CAAAATTGAT TTTTTTGTTG ATACAACTTT AGTTTACACC
TTCAATCCAG AAGTAAAAAA TGAAGATACA TGGCCTTTTG ATAAACCATT TTATATCATT
GTAAATTTGG CAATTGGAGG CAATTTTGGA GGTCCGGAAG TAGATGATTC TGTGTTACCG
CAAAAATATT ACGTAGATTA TGTACGAGTT TACCAATAA
|
|---|
| Protein sequence | MNKIVLLLLI CSFSYAQETK RKLVWEENFS KKNINEKDWN FELGDGCPDL CGYGNNERQI
YTKTNHEIKD GNLIIEARKE GNIYTSTKIT TKGKKEFKYG RIEARAKLPI GHGLWPAFWM
LGANIDEVKW PKTGEIDILE YIGRDPHMVY TTLHTQDSHG NTINTKRTEF PNIEEGYHVY
AIEWNKDKID FFVDTTLVYT FNPEVKNEDT WPFDKPFYII VNLAIGGNFG GPEVDDSVLP
QKYYVDYVRV YQ
|
|---|
| |