| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2388 |
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| Symbol | mnmA |
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| ID | 5092120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2863044 |
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| End bp | 2864231 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644741816 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001194734 |
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| Protein GI | 146300143 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.183005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAG TAGTAGTTGG TCTTTCTGGT GGAGTAGATT CTAGTGTTGC AGCTTATTTA
TTGCAGCAGC AAGGATACGA AGTTATTGGC CTTTTTATGA AGAACTGGCA CGATGATTCG
GTTACTATTT CTAACGAATG TCCTTGGTTA GAAGATAGTA ACGATGCTTT ATTGGTTGCA
GAAAAACTTG GAATACCGTT TCAGACAGTT GATTTAAGTG AAGAATACAA AGAAAAAATC
GTTGATTATA TGTTCAACGA ATACGAAAAA GGAAGAACTC CAAATCCTGA CGTGCTTTGT
AACCGCGAAA TCAAATTTGA TGTTTTTATG AAAATTGCTC TAAGTCTTGG AGCTGATTAT
GTTGCGACTG GTCATTACTG CCAGAAAAGC GAAATTGAAG TTGACGGAAA AACGGTTTAT
CAATTAATTG CCGGAAATGA TGTTAACAAA GATCAGTCGT ATTTTTTATG CCAGTTATCT
CAGGAACAAT TATCAAAAGC ATTGTTTCCA ATTGGGGCTT TGACAAAACC AGAAGTTCGC
GAAATTGCAG CCGAAATGGA ATTGGTTACT GCCGAAAAGA AAGATTCGCA AGGACTTTGC
TTTATTGGAA AAGTGCGTTT ACCTGAATTT TTACAGCAAA AATTACAGCC AAAAGAAGGT
ACAATTGTTC AGATTGATAA AAATGATCCT ATATACAATG TTGAAAAGCA AGCTGGATTG
TCTTTAGAAG AAGAATTAAA AATCGAATCT CAAAAACTGA ACTACCGTCC GGAAATGGGT
AAAGTTATGG GTAAACATCA GGGAGCACAT TATTTTACTG TTGGACAAAG AAAAGGATTG
AATGTTGGAG GTACTACAGA CCCATTATTT GTAATTGCTA CTGATGTTGA TACCAATACA
ATTTATACTG GTTTAACGAG TAATCATCCT GGGTTGTTTA AAAAAGCTTT ATTTGTTGGC
AATTCTGAAG TACACTGGGT TCGTGAAGAT TTGAAACTGA AAGAAGGCGA ACAGATGGAA
GTAATGGCGA GAATTCGTTA TCGTCAGCCA TTGCAAAAAG CAACTTTACA TCAGTTTGCA
AACGGAATGT ATGTTCATTT TGATGAGCCT CAGTCTGCTA TTACAGAAGG ACAATTTGTT
GCCTGGTATT TAGAAAATGA ATTAGTTGGT TCGGGAGTAA TTTCTTAG
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| Protein sequence | MKRVVVGLSG GVDSSVAAYL LQQQGYEVIG LFMKNWHDDS VTISNECPWL EDSNDALLVA
EKLGIPFQTV DLSEEYKEKI VDYMFNEYEK GRTPNPDVLC NREIKFDVFM KIALSLGADY
VATGHYCQKS EIEVDGKTVY QLIAGNDVNK DQSYFLCQLS QEQLSKALFP IGALTKPEVR
EIAAEMELVT AEKKDSQGLC FIGKVRLPEF LQQKLQPKEG TIVQIDKNDP IYNVEKQAGL
SLEEELKIES QKLNYRPEMG KVMGKHQGAH YFTVGQRKGL NVGGTTDPLF VIATDVDTNT
IYTGLTSNHP GLFKKALFVG NSEVHWVRED LKLKEGEQME VMARIRYRQP LQKATLHQFA
NGMYVHFDEP QSAITEGQFV AWYLENELVG SGVIS
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