| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2261 |
|---|
| Symbol | |
|---|
| ID | 5094397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2725328 |
|---|
| End bp | 2727691 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644741690 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001194608 |
|---|
| Protein GI | 146300017 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3179] Predicted chitinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0130083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC TAAAAATATT TGGAAAAGCC AATCCTGTGG TTGGTACTAA AGAATTTTAT
TCAATTAATG ATCTTTTTGG AAATTCAGCT TCTACTCAAT TCAACGAACC AAATTTTGAA
AGCATATCAG ATAATCAGGT AAAATGGAGT ATCTGGGTAT TGTATGGAAA AAGCTGGAAA
AAAGCTACAG AAAATAATAA AACCGGCTTA ACAGTGCCTT ACACTTTTTC TCAAAAAAGC
TTAACTAGAA AAGGCATTAG AATGCTTGTT GAAGCCAATG GCGAAAAAGC TGTCCTTGAT
ATTGTAACAC AAAAAGCATC TAAGGGAAAA ATACTGCATG TAGATTTATT AGACAACAAT
TACAACAAAC CCGCCAGACC ATTTGCTTAT GGCGACTGGA TTATTGCGCG TGTACATTGT
GTTGATATGG AGCTGATGCC TGTAAAGGTA ACTTTATGGG AAGACGACGG CGATAAAGGC
AAAAAAAACA CAACAAATCT AAAAATAGAA CAGAAAAAAG GAGCAGTAAA AAACGGACAA
GCCGATGTTG CTTTTTATCT GGATCCAAGT CATAAATGGC TTGCAAATGC TAAACTGGCT
CCCGGAGATG AAAACGAAGG AGAATTTCAT GAATATTATG TAACAGCAGA AATTTTTGAA
AAAGTCTCTA AAAGAATTGC CAGTAAAAAT ACCAATGTGC CAAACCCTGA TTATAAAAAA
GAACCAGAAG CAAAAAAACA AACTCCGGCA GAGCAAAAAG GACCGTCTAA AAAAGAAACC
AAAAAGATAG CCCTGTCAGA CAAAAAAGTT CAGGATTATC ATGAACAGAA AATTGTTGTG
AAAAATGAAA TCTCAAAAAA TCCTGTCTGG GAAAAGATTA ATAGTTTTAT GATGGTGGGC
GGTGAGGATT CTATTTGGAA TAAGAATCAT AAAGATGGAG AATGCCCAAA TTGTATTGCT
GCTGTAAAGG CAGGACAATT AAAAAAAATA TTTACAAAAA CAGATCTGAC TATTTTAGAA
ACTGTTGGCG CAATATATAC AAAGTATATG AAAGAGCTGG GTATGGATAC CTGCTGGAAC
AAAGCGCACT TTTTTGCGCA GGCAGTTGTA GAGAGTGGCT TACAAATGAA ACTAAAAAAT
GGAGAAAGTT TTAATTGGTA CTTTCAAGAC TTGATTGATA CTTTTGGCAA ATTTCAAACT
GAGGAAGGCA AGAAAAAGGC AAAAGAATGG GGGCGAAAAA TTAAAAATAG AAAAGATCCA
CAAGCAGTTG ACGTTACTCC AGAAAATGAA AAAAATATTG CTAATTGGGC TTATATGCCA
GATTATAAAA CAGGTAAGAG CTTAGGGAAT AAAGGAGGTA ATGATGGATG GGATTTTAGA
GGAAGAGGAT TATTGCAATT GACAGGAAGA GGTGGTTATG AATATGCAAA TTCTTATACA
TTAAAAATAG GATCTGATAT TGTTAACTAT CCAGAATTGG TAGGAACAGA TATAAGAGTT
GCAGTTTTAT CTTCTATGGC TTTTTTTAAA TGGAAGGGGT TAAATACAAT TGCAAATGGG
ACGACGGATG TAAAAGGAAA AATTTGCCCT CAAGTTGGGA ATAATGTTAA AGTAAAAGAT
AAAAATGGAA ATGATTCTTC AAATTATGAA GAAAAACAAG ATGTTTTTAC AAATATTACT
TCCAAAGAAT TTTTAATAAA TACATGTAAG TGGAATAAAA ATATATCACG CAAATGGCAT
GAGCCAGTAG ATAATCCTAT GTCAACTCTT TATACACAAA GTGGGAATGG TGGAAAATCT
GGGGAACATT GGGGCTTATT CGGAAATACA AGAAATGGTA GTGTGCATCA AGGGTTGGAT
TTATTTGTTG AACTAGGAAG TAACGTATAT TCTTGCGTTG AGGGTGAAGT ATATAAAATT
GAAACCCATT CAGGGTATGG AAAAACGGTT ACAATTAAAG TAACAGATAA GGAGGCTTTT
TATAATCGCA GAAGAGAATA TAAGATATTA TATTCAGTTG AAGGAGAAAA AATTCAGGGA
GAATATTTTG ATAAAAATCA AGACATATTT CTATTCTATG CTCATTTGCG AAAAGTATTG
GTAACTAAAG GACAAAAGGT TGAAGCTGGG AAAATTATTG CCCATAGTGG AGTTTCAGGT
GTAGATTCTG GTACATGTGC ACCGCATTTA CATTTTGAGA TTTTTACTAC TGTATATGCA
GTTGGAATGG GATTGAATTA CAGATGTAAT CCTGGGTTTT ATGTGCACTT TAAAGGTGCA
TCAGAACAAT CAAAACAAGA AAAAGACTTA CAAAAGAAAA TATCAGAAAA AGGAAAAACC
ATAGAGATTA ATGGAAAAGA TTAA
|
|---|
| Protein sequence | MAKLKIFGKA NPVVGTKEFY SINDLFGNSA STQFNEPNFE SISDNQVKWS IWVLYGKSWK
KATENNKTGL TVPYTFSQKS LTRKGIRMLV EANGEKAVLD IVTQKASKGK ILHVDLLDNN
YNKPARPFAY GDWIIARVHC VDMELMPVKV TLWEDDGDKG KKNTTNLKIE QKKGAVKNGQ
ADVAFYLDPS HKWLANAKLA PGDENEGEFH EYYVTAEIFE KVSKRIASKN TNVPNPDYKK
EPEAKKQTPA EQKGPSKKET KKIALSDKKV QDYHEQKIVV KNEISKNPVW EKINSFMMVG
GEDSIWNKNH KDGECPNCIA AVKAGQLKKI FTKTDLTILE TVGAIYTKYM KELGMDTCWN
KAHFFAQAVV ESGLQMKLKN GESFNWYFQD LIDTFGKFQT EEGKKKAKEW GRKIKNRKDP
QAVDVTPENE KNIANWAYMP DYKTGKSLGN KGGNDGWDFR GRGLLQLTGR GGYEYANSYT
LKIGSDIVNY PELVGTDIRV AVLSSMAFFK WKGLNTIANG TTDVKGKICP QVGNNVKVKD
KNGNDSSNYE EKQDVFTNIT SKEFLINTCK WNKNISRKWH EPVDNPMSTL YTQSGNGGKS
GEHWGLFGNT RNGSVHQGLD LFVELGSNVY SCVEGEVYKI ETHSGYGKTV TIKVTDKEAF
YNRRREYKIL YSVEGEKIQG EYFDKNQDIF LFYAHLRKVL VTKGQKVEAG KIIAHSGVSG
VDSGTCAPHL HFEIFTTVYA VGMGLNYRCN PGFYVHFKGA SEQSKQEKDL QKKISEKGKT
IEINGKD
|
|---|
| |