Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2240 |
Symbol | |
ID | 5092246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2695717 |
End bp | 2697180 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644741669 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001194587 |
Protein GI | 146299996 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAACT CCTCTCTAAA AACACTAGCT GCGAAAGGCA TTTTTTGGTC TGCGGTTGAT AAATTTGCCG TTCAGATTGG GCAATTTGTA GTTAGTATTG TACTTGCGCG AATTTTACTG CCAGAGGATT TTGGTCTGAT AGGAATGCTG GCTATTTTTA TGGCCTTGTC ACAAACTTTT ATTGAAAGCG GTTTAGGAGT AGGTTTAATT CAGCGTCAGG ACAGAACAGA TGTTGATTTC TCGACTGTAT TTGTCTTTAA TTTAGCAGTA AGTGGTTTTT TCTATTTATT ACTGTTTTTT TCTGCACCAT TAATAGCTGT TTTTTTTAAT CAGCCTCAAT TAATAAACCT AGTACGAGTA TTGGGTTTAA GTTTGTTTTT GAATGCTGCA GCGATAGTTC AAAAAACGAA ACTGACAATT GCTGTCGATT TCAAATCCAT TGCAAAAAGT AATGTAATAT CAGTATTTGC AGGCGGGTTA TGCGGTATTG TGGCAGCAAT AAATAATTGC GGAGTCTGGT CGCTGGTTAT TCAAAGTCTT GTTGGCGCTT TTGTTTCGTC AGTTTGTTTG TGGTTTTTAA GCAGCTGGAA CCCTTCAGTA TTATTTTCAA AGAAATCTTT TAAATCTTTA TTTGGCTACG GATCAAAACT TTTAATGGCA GGTTTGTATG CTCAATTATT AAATAATGTT TATAATATTT GTTTAGGGAA ATTTTATCCA ACAGCTTCAT TAGGTTATTA TACAAGAGCT AAAAGTTTTG CCGATTTATC AGCCGGAACA ATTGTTAGCA TAATTCAGCA GGCAACATTT CCTGTTCTTA CTACAGTTCA AAATGATAGA GAAAGATTAG TTTCCATCTA CAGCCGAATG ATTCGCATGT CAGCTTTTTT GATTATTCCG TTAATGACAC TTATTGCTTT GCTGGCAAAA CCAATTGTTG TATTGCTGCT TACCGAAAAA TGGGTTTCTT TAATTCCGCT TTTACAATGG ATGGTTTTTG CCCGTATTTT TTTTCCTATG AGTGCAATTA ATATGAACTT ATTAAATGCA GTTGGCCGTT CAGATTTATA CTTAAAAGTC GATTTATCCA AATTACCTCT AACAGTGGCA GCAATGATAA TCACAATTCC GTTAGGTGTC AAAGCCATCA TAATTGGGCA TGTAATTACA TCGGCTCTAT CATTTGTAAT AAATGCCTAT TTACCCGGAA AATTTTATGG TTATGGAGCT GTGAAGCAAT TAAAAGATAT GCTTCCTTTT TTTGGAGCAT CAATAGCAAT GGCAGTTTTA GTATATGTAA CAGCCTATTT TATAGATAAT TTAGTAATTC AGTTGTTATT TGGCGGGATA ATTGGGCTTG TAAGTTATTT GTTTATATGC AGACTGCTAA AATTGGAAGA ATTAAAAGAA GGCTGGGAAC TATTTTTGAG TTTGAGAAGA AAAACAATAA AAGAAGATAT TTAG
|
Protein sequence | MQNSSLKTLA AKGIFWSAVD KFAVQIGQFV VSIVLARILL PEDFGLIGML AIFMALSQTF IESGLGVGLI QRQDRTDVDF STVFVFNLAV SGFFYLLLFF SAPLIAVFFN QPQLINLVRV LGLSLFLNAA AIVQKTKLTI AVDFKSIAKS NVISVFAGGL CGIVAAINNC GVWSLVIQSL VGAFVSSVCL WFLSSWNPSV LFSKKSFKSL FGYGSKLLMA GLYAQLLNNV YNICLGKFYP TASLGYYTRA KSFADLSAGT IVSIIQQATF PVLTTVQNDR ERLVSIYSRM IRMSAFLIIP LMTLIALLAK PIVVLLLTEK WVSLIPLLQW MVFARIFFPM SAINMNLLNA VGRSDLYLKV DLSKLPLTVA AMIITIPLGV KAIIIGHVIT SALSFVINAY LPGKFYGYGA VKQLKDMLPF FGASIAMAVL VYVTAYFIDN LVIQLLFGGI IGLVSYLFIC RLLKLEELKE GWELFLSLRR KTIKEDI
|
| |