Gene Fjoh_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2224 
Symbol 
ID5092230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2678728 
End bp2679516 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content37% 
IMG OID644741653 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001194571 
Protein GI146299980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA TCACTTCAGT TCAAAATCCG TTTATAAAAT CGCTTGCTTT ATTACAGGAA 
AAAGCAAAAG CAAGAAAACA AACCGGAACA TTTTTAATTG AAGGACAACG CGAAATTTCA
TTAGCGATAA AAGGCGGTTA TGAAATTGAA ACGGTTTTGT TTTTACCCGA TTTAGTTACC
GAAAATCAAA TCAATAAATT AGTTGGTTCG TCGGTTCAGT TAATCGAAAT CAACAAAGAA
GTCTATCAAA AACTGGCTTA CCGCGATACG ACCGAAGGTA TTTTGGCTGT AGCCAAAACC
AAATCATTAA AATTATCCGA TTTAAAACTA TCTGATAATC CATTAATTTT AGTAGCCGAA
TCACTCGAAA AACCAGGAAA TGTGGGCGCC GTTTTACGTA CTGCCGACGC TGCAAATCTT
GATGCCGTTT TAATTGCAGA TCCAAAAAGT GATTTATACA ATCCAAATAT TGTGCGTTCC
AGCGTTGGCT GTTTGTTTAC CAATCAAATT GCAACTGGAA CAACCGAAGA AATTATTGCT
TTTTTAAAAG AAAAAAACAT CAGTTTTTAT TCGGCAACCT TACAAAATTC AACTTCATAC
CATACCCAAA ACTTCACTGC TCCGACTGCT TTAGTTGTGG GTACAGAAGC AACTGGTTTA
TCTCAGAAAT GGCGTGACGA AGCAACGCAG AACATCATTA TTCCAATGCA GGGAGAAATC
GACAGCATGA ACGTTTCTGT CGCAGCCGCT ATTTTAATTT TTGAAGCTAA AAGACAAAGG
GGATTTTAG
 
Protein sequence
MKQITSVQNP FIKSLALLQE KAKARKQTGT FLIEGQREIS LAIKGGYEIE TVLFLPDLVT 
ENQINKLVGS SVQLIEINKE VYQKLAYRDT TEGILAVAKT KSLKLSDLKL SDNPLILVAE
SLEKPGNVGA VLRTADAANL DAVLIADPKS DLYNPNIVRS SVGCLFTNQI ATGTTEEIIA
FLKEKNISFY SATLQNSTSY HTQNFTAPTA LVVGTEATGL SQKWRDEATQ NIIIPMQGEI
DSMNVSVAAA ILIFEAKRQR GF