| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2184 |
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| Symbol | trmD |
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| ID | 5092803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2641545 |
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| End bp | 2642225 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741613 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001194531 |
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| Protein GI | 146299940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.45875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATTG ACATTATAAC GGTTTTGCCA GAATTATTAA GAAGTCCGTT TGAGGCTTCG
ATTATGAAAC GTGCTATTGA CAAAGGTTTG GTTGAAGTAC ATTTTCATAA TTTGCGCGAC
TATACAACCA ACAAACAAAA AAGCGTAGAT GATTATCAGT TTGGCGGAGG CGCCGGAATG
GTCATGATGA TACAGCCAAT TGACGATTGT ATTACACATT TAAAAAGTGA GCGTGAATAC
GACGAAATCA TTTATATGTC TCCAGACGGC GAAACTTTAA ACCAAAAAAT GGCCAACAAA
ATGTCAATGT ATGAAAACAT AATTATTTTA TGCGGACATT ATAAAGGTGT CGATCAGCGC
GTAAGAGATC ATTTTATTAC GAAAGAAATT TCTATTGGTG ATTATGTTTT ATCTGGCGGA
GAATTAGGCG CTTTGGTTTT ATCTGATGCT TTGATTCGTT TAATTCCGGG TGTTTTAAGT
GATGAAACTT CAGCCTTAAC GGATAGTTTT CAGGATAATT TACTTTCTGG ACCTATATAT
ACAAGACCAG CCGATTATAA AGGATGGAAA GTTCCCGAAG TTTTAACCAG CGGGCATGCT
GCTAAAATAG AAAAATGGCG TGAAGATGCC GCATACGAAC ATACTAAAAA CAGACGACCG
GATTTATTGG AAGAGCATTA A
|
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| Protein sequence | MRIDIITVLP ELLRSPFEAS IMKRAIDKGL VEVHFHNLRD YTTNKQKSVD DYQFGGGAGM
VMMIQPIDDC ITHLKSEREY DEIIYMSPDG ETLNQKMANK MSMYENIIIL CGHYKGVDQR
VRDHFITKEI SIGDYVLSGG ELGALVLSDA LIRLIPGVLS DETSALTDSF QDNLLSGPIY
TRPADYKGWK VPEVLTSGHA AKIEKWREDA AYEHTKNRRP DLLEEH
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