Gene Fjoh_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2180 
Symbol 
ID5092799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2635076 
End bp2637457 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content33% 
IMG OID644741609 
ProductTonB-dependent receptor 
Protein accessionYP_001194527 
Protein GI146299936 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.111173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAA AAAAAATCAG CCTTTTTCTA ATTATTATCT TTACGACTTT TACTTCTTTT 
TCTCAGGATA AATTTACACT AAGCGGTACT ATAAAGGATT CAAAAAACAA CGAAACCTTA
ATTGGTGTCA ATATTTATAT TCCAGCTTTA AAAATAGGAA CAACCACAAA CGAATACGGT
TTTTATTCTA TAACAGTGCC GCGGGGCGAA CATCAAATAG AAATCAGTTA TATAGGTTAT
CAAACCATTC AGCAGACTAT CAATTTAAAT CAAAATACTA AGAATAATTT TTATATCAGC
GAAAGCGGTG AAGAACTGCA AGAAGTTATT ATAACCGACA ATAAAGGCAA AATAAATATC
AAATCGCCAG AAATGAGCGT GAATAAACTC TCTATTTCAA CCATAAAAAA AATGCCGGTA
GTTTTAGGAG AAGTCGATGT TTTAAAATCG ATTTTATTAC TTCCCGGAGT TACAAATGCC
GGCGAAGGCG CATCAGGATT TAATGTTCGG GGCGGCGGTG CTGACCAGAA TTTAATTTTG
TTAGATGAAG CTACAATTTT TAATTCATCA CACGTTTTCG GGTTCTTCTC AGTCTTTAAT
CCAGATGCCA TTAAAGATTT AAAATTATAC AAAGGAGGTA TTCCGGCACG TTTTGGAGGA
AGAGCTTCAT CTGTTCTGGA AATTTACCAG AAAGACGGAA GCAGTAAAGA TTTTCATGTA
AACGGAGGAA TTGGTTTAAT ATCCAGCCGT CTTCTTGTAG AAGGTCCAAT TGTAAAAGAC
AAAGGTTCTT TTTTAATTGG AGGACGTGCT TCTTATGCGC ATTTGTTTTT AAAGCTTTCT
GAAGACAACA AAGACAACTC AGCTTATTTT TACGATTTAA ATGCAAAATT CAGTTACAAA
TTAAACGATA ATAACAGCTT ATATTTATCC GGATATTTTG GACGCGATGT TTTTAGTCTG
AATAAAAGTT TTACCAATAT TTATGGAAAT TCAACTTTAA ATCTTCGCTG GAACCATTTG
TACTCAAATA AATTATTTTC GAATTTATCT TTAATTTACA GTGACTATTA TTATGGACTT
GATCTGGATT TTGTTGGTTT CAAATGGGAT TCAGGAATCA AAAACTACAA TATCAAATAC
GATTTCAAAC ATTATATTTC AGATAAATTC AAATTGAATT ATGGTTTAAA CGGAATTTAT
TATGAATTTA ATCCGGGAAC CATTAAACCA AGCAGTACTG ATTCAGGAAT TAATCCGGAT
CAATTAGATA AAAAATATGC TTTTGAACCT TCGGTTTACT TAGATGCCGA AAATCAGCTT
TCTAAAAAAA TTACGGTTGC TTACGGTTTA CGATACAGTT TATTTTATCG TTTGGGTTCG
TCAACTGTTA ATTATTATGA CAATAATAGT CCTGTTGTTT TTAATTCTGA TATGCAGATT
TATGAAAAAG GAACTCCTGC TTCAACGAAA TATTTTGGTA AGAATAAAGT AATTCAGGAT
TATAATAATC TAGAACCGCG ACTTGCCATA TCGTATCAAT TAAATGAAGA TCAGTCAATA
AAAGCGAGTT ATAATCGAAT GGCGCAATAT CTTCAATTAA TTTCAAACAC CTCATCTCCT
ACTCCGCTGG ATGTCTGGAT GCCAAGCGAT AATTACATCA AACCACAGAT AGCAGATCAG
GTAGCTTTAG GATATTTCCG AAATATTAAA GGAGGAGATT ATTCACTTGA AGTTGAAACT
TTTTACAAAA AAATTCAAAA CAGGCTGGAT TATATAGACG GTGCCGATTT AATTGCAAAT
AATGCTATCG AGCAGGTAAT TTTAAACGGA AGAATGCGTG CTTACGGTCT AGAAATTATG
GTGAAGAAAA ACACTGGAAA ATTCAACGGC TGGATTTCTT ATACTTTATC AAGATCTGAA
CAGCAGACAC CGGGAAGAAC TCCTGAAGAA ATTGGAATTA ATGATGGTCA ATGGTACAGT
TCTGCTTACG ATAAAACGCA TAATCTGGCT GTAACATCTG CTTATAATTT AAATGAAAAA
TGGTCATTTG GCGCTAACTT TGTTTTACAA TCCGGACAGC CGGTTACGTA TCCAAACGGG
CAGTATGAAT ACTTAGGAAT TACAGTTCCA AGTTACGGTT TACGAAATGA GAATCGTCTT
CCTGCTTATC ACCATTTAGA TATTTCGGCA ACTTTAACAC CAAGAAAAAA TAAAGACCGA
AACTGGAAAG GCGAATGGGT TTTCAGTATT TATAATTTAT ATAACCGAAG TAACGCTGCT
TCTATTAATT TCAGGCAGAA TTCTGACACA GGAATAAACG AAGCTGTACG ATTTTCAATA
TTTGGTATAG TGCCTGCAGT TAGTTACAAT TTTAAATTTT AA
 
Protein sequence
MITKKISLFL IIIFTTFTSF SQDKFTLSGT IKDSKNNETL IGVNIYIPAL KIGTTTNEYG 
FYSITVPRGE HQIEISYIGY QTIQQTINLN QNTKNNFYIS ESGEELQEVI ITDNKGKINI
KSPEMSVNKL SISTIKKMPV VLGEVDVLKS ILLLPGVTNA GEGASGFNVR GGGADQNLIL
LDEATIFNSS HVFGFFSVFN PDAIKDLKLY KGGIPARFGG RASSVLEIYQ KDGSSKDFHV
NGGIGLISSR LLVEGPIVKD KGSFLIGGRA SYAHLFLKLS EDNKDNSAYF YDLNAKFSYK
LNDNNSLYLS GYFGRDVFSL NKSFTNIYGN STLNLRWNHL YSNKLFSNLS LIYSDYYYGL
DLDFVGFKWD SGIKNYNIKY DFKHYISDKF KLNYGLNGIY YEFNPGTIKP SSTDSGINPD
QLDKKYAFEP SVYLDAENQL SKKITVAYGL RYSLFYRLGS STVNYYDNNS PVVFNSDMQI
YEKGTPASTK YFGKNKVIQD YNNLEPRLAI SYQLNEDQSI KASYNRMAQY LQLISNTSSP
TPLDVWMPSD NYIKPQIADQ VALGYFRNIK GGDYSLEVET FYKKIQNRLD YIDGADLIAN
NAIEQVILNG RMRAYGLEIM VKKNTGKFNG WISYTLSRSE QQTPGRTPEE IGINDGQWYS
SAYDKTHNLA VTSAYNLNEK WSFGANFVLQ SGQPVTYPNG QYEYLGITVP SYGLRNENRL
PAYHHLDISA TLTPRKNKDR NWKGEWVFSI YNLYNRSNAA SINFRQNSDT GINEAVRFSI
FGIVPAVSYN FKF