Gene Fjoh_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2175 
Symbol 
ID5092794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp2631954 
End bp2632616 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content37% 
IMG OID644741604 
Productthiamine pyrophosphokinase 
Protein accessionYP_001194522 
Protein GI146299931 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.227177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAC ACCATATTGT ACGCGACGAT CAGGAACCTG CTTTAATAAT TGCCAATGGA 
GCTGCCTGTA ATCCCGAATT ATTAGGCCAA TTGCTAGAAT GGTCTCCGCT TGTTATAGTG 
TTAGACTCTG CCATTGAAAG GGTAATTGAA TTAGGAATTA AAGTCGATGT GCTTCTGGGA 
GATTTTGACC GCGGTTTCGA TCCGGAAGTG TATAAAACTT CACAATATCC TATCGAAATT 
GTTCATACAC CGGATCAGGA CAAAACCGAT TTAGAGAAAG CTTTTGATTA TTTGGTTAAA 
AGAAAAATCC CTGCCGTAAA TGTAGTCTGG GCAACAGGAA AACGTGCCGA TCATACAATT 
ACAAACCTTA CGAATATTGT TCGTTACCGT GATTTAATAA AAATTGTAAT TCTCGACGAT 
CATTCTAAGA TTTTCCTTCT TCCAACGAAA TTTGAAAAAT GGTATACAGC AAAAACACCT 
ATTTCATTGA TTCCAATTGG GGTTGTAAAT GGTATTTATT CAACCAACTT AGAATATCCT 
CTGCAAAATG ACACCTTAAC CATGGGGTAT AGAACCGGAA GCAGTAATTC TGTTGAAAAA 
GATGGTCTTG TTACTATTTC TCATTCAAAT GGCGATTTAC TGCTAATGGA ATGTTTTGAT 
TAA
 
Protein sequence
MSSHHIVRDD QEPALIIANG AACNPELLGQ LLEWSPLVIV LDSAIERVIE LGIKVDVLLG 
DFDRGFDPEV YKTSQYPIEI VHTPDQDKTD LEKAFDYLVK RKIPAVNVVW ATGKRADHTI 
TNLTNIVRYR DLIKIVILDD HSKIFLLPTK FEKWYTAKTP ISLIPIGVVN GIYSTNLEYP 
LQNDTLTMGY RTGSSNSVEK DGLVTISHSN GDLLLMECFD