| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2165 |
|---|
| Symbol | |
|---|
| ID | 5092784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2621982 |
|---|
| End bp | 2622689 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 644741594 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001194512 |
|---|
| Protein GI | 146299921 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0607611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTA AATGTATTAT TGTTGATGAT GAACCGCCTG CAACACGGAT ACTCGAAAAT
TATATTGGAA AAGTAAGCTT TTTAGAAAAA ACCGAAGTTT TTAACGATTC ATTAAAAGCG
TTAGAGTTTT TAAATACACA ATCTGTTGAT GTGATTTTCC TGGATATCCA AATGCCTCAA
TTAACAGGAT TACAGATTTC CAGAATTATT TCAAAAGATA TAAAAGTTAT TTTTACAACT
GCATATCCTG ATTTTGCATT AGAAGGTTTT GAATTAAACG CTGTTGATTA TTTATTAAAG
CCTATATCTT TTGAACGGTT TTATCAAGCT GTTTCTAAGC TGAATACTCA GTCAAAAACA
GTTGTTTCAA ATCAAAATAA TCTGCCTGAT TTTTTATTTA TTAAAACAGA TGGAAAGAAT
AAATTCCAGA AGGTTTTTTT AAATGATATT TTGTATGTAG AAAGTCTTCA GAATTATGTT
TGTATTCATA CTTCTAAACA GCAGATTATT ACGCATTCAT CATTGAAAAA TGTAATCGAA
TCTTTGCCTG AAAACAATTT TATTCAAATA CAAAAATCCT ATGTTGTTTC TTTAAAGCAT
TTAGAATCAA CAGACAATTA TTCGGTTTAC ATTAACGGAA AAGAACTTCC AATTGGAGCT
GCTTATAAAG AAGCATTTTT TGATAAAATC GAGGAGAATA AGATTTAA
|
|---|
| Protein sequence | MAFKCIIVDD EPPATRILEN YIGKVSFLEK TEVFNDSLKA LEFLNTQSVD VIFLDIQMPQ
LTGLQISRII SKDIKVIFTT AYPDFALEGF ELNAVDYLLK PISFERFYQA VSKLNTQSKT
VVSNQNNLPD FLFIKTDGKN KFQKVFLNDI LYVESLQNYV CIHTSKQQII THSSLKNVIE
SLPENNFIQI QKSYVVSLKH LESTDNYSVY INGKELPIGA AYKEAFFDKI EENKI
|
|---|
| |