Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2134 |
Symbol | |
ID | 5093895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2584127 |
End bp | 2584669 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741563 |
Product | Lipocalin family protein |
Protein accession | YP_001194481 |
Protein GI | 146299890 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0834445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTA AATATATAGT TCCAGTTTTG ATTGGAGCAG GAATTGGTCT CGCATTGTAT TCTTGCGGAG GAGGAATTCC AGAGAAAGCA AAAGCTGTAA CAAATTTTGA CAGCGCAAAA TATCTCGGAA AATGGTATGA AATTGCCAGA TTAGATTACA AATGGGAAAG AGATTTGAAC AATGTAACAG CCGAGTATTC TTTAAACGAA GATAAAACTA TAAAAGTCGA TAATAAGGGC TATAATGTCA AAAAAGACAA ATGGGAACAA AGTGTCGGGA AAGCTAAATT TGTCAAAAAA GACAACATTG GTATGCTAAA AGTCTCATTT TTTGGTCCTT TTTATTCTGG TTACAATGTC GTAGCAATCG ATCCTGATTA TAAATATGCA CTTGTAGCTG GAGAAAGTTT AAAATATATG TGGATACTTT CCAGAGAAAA AACAATTCCG GAAAGTGTAA AAGCAGATTT TCTTATCAAA GCTCAGGAAA TCGGATATAA AGTAACTGAT TTGGTTTGGG TAAAGCATGA TAAGTTGAAT TAA
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Protein sequence | MKSKYIVPVL IGAGIGLALY SCGGGIPEKA KAVTNFDSAK YLGKWYEIAR LDYKWERDLN NVTAEYSLNE DKTIKVDNKG YNVKKDKWEQ SVGKAKFVKK DNIGMLKVSF FGPFYSGYNV VAIDPDYKYA LVAGESLKYM WILSREKTIP ESVKADFLIK AQEIGYKVTD LVWVKHDKLN
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