| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2105 |
|---|
| Symbol | |
|---|
| ID | 5093868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2541980 |
|---|
| End bp | 2543023 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 644741529 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001194454 |
|---|
| Protein GI | 146299863 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA AATTATTAGC TTTTTTATCG CTATTATCTG GAAGCTTATT CTCTCAAGAA
ATGAATAAAA AAATAGATGA ATATATTAAT TACATAGAAA CTAATAATGG CGGAATTGGC
AGCTTGTCAA TATATAAGAA CTCACAAGAA GTTTATAACA GAAGTTTTGG ACAAGATAAA
TTAATTGGTG TACATTATAA CAAAAATACG GAATATCATA TTGCTTCTGT AACGAAAATG
GTTACCGCGA TTTTAGTTTT CAAATTAATA GAAAATGACA AATTAAAATT AGATACTAAA
TTATCTGATT TTTATCCAGA GATACCTAAT TCAAAAGTGA TAACAATTAA AAACATGTTA
GAGCATACAA GCGGATTGGG AAATTTTGCA ATAAAAGATG GTGTTGTCTG GGTAACCCAA
AAAGTAAGCG AACAAGAAGT TTTTGACGAA ATAAAAAGAC AGGGTGTAAG TTTTCAGCCA
AATGAAAAGG TTGTCTATTC AAACTCTGCA TACCTTCTAT TGAGAATGAT AATTGAAAAA
ATATATAATA CACCTTATAA TAAAATTGTT GAACAGGAAA TAATAAAACC TTTAAAACTT
AAAAATTTTG CGTCAGTAAA ATCAAATCCA AAAAACACTT TTAATTCCTA TAAATTCACA
GAAAACTGGA CTGAAATTAA AGATATTGAA TACTCTAATG TAATAGGCGT TGGAGACATT
TCAAGTACGA CTAAAGACAT GAACATTTTA ATTAATAATT TGTTTCAGAA CAAATTAGTG
AAAAGGGAAA CTTTAGAAAT CATGAAACCC ATTGGAAAAG ATGAATGGGG AAGAGGTTTA
GCGCTGTACC CTTTTAAGGA GAATATTTTT TATGGACATA GCGGCGATGT ACTTGGTTCT
CATTCAATAG CTTTATATAA TGAGAAAGAT AAAATATCCA TATCATATTC TACAAATGGA
GAAAGAATTC CCACTAATAC TTTTATAGAA GTCCTGATAA ATATTATTTA CGACAAAGAG
TTTAAGCTGC CTGAAATTAA ATAG
|
|---|
| Protein sequence | MKFKLLAFLS LLSGSLFSQE MNKKIDEYIN YIETNNGGIG SLSIYKNSQE VYNRSFGQDK
LIGVHYNKNT EYHIASVTKM VTAILVFKLI ENDKLKLDTK LSDFYPEIPN SKVITIKNML
EHTSGLGNFA IKDGVVWVTQ KVSEQEVFDE IKRQGVSFQP NEKVVYSNSA YLLLRMIIEK
IYNTPYNKIV EQEIIKPLKL KNFASVKSNP KNTFNSYKFT ENWTEIKDIE YSNVIGVGDI
SSTTKDMNIL INNLFQNKLV KRETLEIMKP IGKDEWGRGL ALYPFKENIF YGHSGDVLGS
HSIALYNEKD KISISYSTNG ERIPTNTFIE VLINIIYDKE FKLPEIK
|
|---|
| |