| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2082 |
|---|
| Symbol | |
|---|
| ID | 5092095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2469121 |
|---|
| End bp | 2470923 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644741506 |
|---|
| Product | Beta-glucuronidase |
|---|
| Protein accession | YP_001194431 |
|---|
| Protein GI | 146299840 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.177163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGTAATGCT GTGCTGTACT TTTCTACTGA TGGGAAAAGC AATAGCACAG
GAAATTCCGT TGGTTTCTAA TATTTCGTCA AGGAACAATA TTACTTTAAA TGGAAAATGG
AGTTATATCG TAGATCCGCT AGAAAACGGG TATTACGATT ACCGATTAAT GCCTTTTAAA
AATAATGGAT TCTTCGAAAA TAAAAAATTC AATACCACAG ATTTAACCGA ATATAATTTT
GCGACTTCTG CCACAATGGA TATTCCATCA GATTGGAACA GCAAAGACGA AAGATTGTTT
TTTTATGAAG GAACTGTTTG GTTTCAGAAA GACTTTAATT ATAAAAAAGA TTCTAAAACC
AAAGGGATTC TTCATTTTGG AGCAGTCAAT TATGATGCAA AAGTCTATGT AAACGGAAAA
CTGGCAGGAA CACACGTTGG AGGTTATACA CCTTTCAATT TTGATGTAAC TGATCTATTA
GTCGACGGGA ATAATTTTGT AGTTGTAAAA GTAGATAACA AGCGTCACAA AGATAATGTT
CCAACTGTAA ATATGGATTG GTGGAATTAC GGCGGAATTA CAAGAGATGT TACTTTGGCT
CAGGTTCCGA ATACGTATGT GGAAGATTAT TTGGTTCAAT TGGATAAAAA AGAAAAAGGC
AAGATTTCCG GCTGGATAAA ACTGAATAGT GAAACAGCAA ATCAATCCAT TTCAGTTTCT
ATTCCAGAAT TAAAAATCAA AAAAAGCATT ACAACAGATG CTAAAGGAAT GGCGTATTTT
GAAATTAAAG CCAATCCGGT TTTATGGACG CCGGAAAAAC CAAAATTATA CGATGTAACC
ATTTCCAAAG CCGATGAAAA TATAACAGAT CAAATTGGTT TTAGAACTAT TGAAACCAAA
GGAAAAGAGA TTCTGTTAAA CGGAAAAAAA GTCTTTTTAA GAGGAATCAG TATTCATGAA
GAAGCACCTT TCAGATCGGG TAGAGCTTGG TCTGAAGATG ATGCGATAAC GTTATTGAAT
TGGGCCAAAG AGTTAGGCTG TAATTATGTT CGTCTGGCAC ATTATCCTCA CAACGAAAAT
ATGGTAAGAC AAGCTGAGAA AATGGGAATT ATGATTTGGT CTGAAGTTCC TGTTTATTGG
ACCATTTCAT GGACAAATCC TGATACGTAT GCTAATGCAG AGCGTCAATT ACACGATATG
ATTTACAGAG ATAAAAACCG CTGCGGAATC GTGATTTGGT CTATCGCCAA TGAAACACCG
CATAGTGATG AAAGAGATGT TTTTCTGAGT AAATTGGCTA AATATGCACG CACGCAGGAT
AATACTCGTT TAATTAGTAT GGCGATGGAA GTTACCAAAA GTCCAAACAA TGTAAATACA
CTTCATGATA ACATGAATGA ATTTGTAGAC ATTGTAAGTT TCAATCAATA TCTGGGCTGG
TACAGAGGAA CGAATGAATC TTGTAAAGAT ATGCAATGGG TGATTCCGTA TAACAAACCA
GTTATTATCA GCGAGTTCGG AGGAGAAGCT TTACAAGGAC TTCACGGAGA TAAAAAAGAA
CGCTGGAACG AAGAATATCA GGAAGAATTA TACATTCAAA ATACTCAGAT GTTTAATCGT
ATAGAAGGTT TAGCAGGAGT TTCACCCTGG ATTTTAGTTG ATTTTAGATC ACCAAGAAGG
CAATTGCCAA ACATTCAGGA TTTCTTTAAC CGCAAAGGCT TAATCTCAGA TCAGGGAATT
AAAAAGAAAG CTTTTTATGT AATGAAAGAC TGGTATGCAC AGAAAGAGCA GGAATATAAA
TAA
|
|---|
| Protein sequence | MKKIVMLCCT FLLMGKAIAQ EIPLVSNISS RNNITLNGKW SYIVDPLENG YYDYRLMPFK
NNGFFENKKF NTTDLTEYNF ATSATMDIPS DWNSKDERLF FYEGTVWFQK DFNYKKDSKT
KGILHFGAVN YDAKVYVNGK LAGTHVGGYT PFNFDVTDLL VDGNNFVVVK VDNKRHKDNV
PTVNMDWWNY GGITRDVTLA QVPNTYVEDY LVQLDKKEKG KISGWIKLNS ETANQSISVS
IPELKIKKSI TTDAKGMAYF EIKANPVLWT PEKPKLYDVT ISKADENITD QIGFRTIETK
GKEILLNGKK VFLRGISIHE EAPFRSGRAW SEDDAITLLN WAKELGCNYV RLAHYPHNEN
MVRQAEKMGI MIWSEVPVYW TISWTNPDTY ANAERQLHDM IYRDKNRCGI VIWSIANETP
HSDERDVFLS KLAKYARTQD NTRLISMAME VTKSPNNVNT LHDNMNEFVD IVSFNQYLGW
YRGTNESCKD MQWVIPYNKP VIISEFGGEA LQGLHGDKKE RWNEEYQEEL YIQNTQMFNR
IEGLAGVSPW ILVDFRSPRR QLPNIQDFFN RKGLISDQGI KKKAFYVMKD WYAQKEQEYK
|
|---|
| |