Gene Fjoh_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2039 
Symbol 
ID5092053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2397653 
End bp2399971 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content36% 
IMG OID644741464 
ProductBeta-N-acetylhexosaminidase 
Protein accessionYP_001194389 
Protein GI146299798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3525] N-acetyl-beta-hexosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTA TAAAATCTTA TTTGATAATC GGTTTTCTTG CTCTTGTAAC TTCTTCGTAT 
GCACAGAAAG TTTTCACAGA GAAAGACATT CGTATCATTC CAAAACCAAC TCAGACTCTA
ATAAAAACCG GTGTTTTTGA ATTTAATAAA GATACAAAGT TTGTTACCGG AAATGATTTC
CAAAAAGACG CTGCGAATGC TTTGGCTTCT AAATTAGCCA TTGCAGCAGG ATGGAAACCA
GAAACAACAA CAAAAGCTCC GGCAAGTAAT TTTGTTCAGT TTAAAACAGA TCCAAACTTA
AAAAATGAAG CTTATATTTT AGACGTAAAT CCAAATAGTA TTGTTATTTC GGCTAAAGGA
AATACAGGTT TTTTATACGG TCTGGAAAGC ATCAGACAAT TACTTCCTGA AGCAATCGAA
AGCCAATATG CCGTAACATC TGCAAAATGG CAGATTCCAA GTTTAACGAT AAATGATGAA
CCTCGATTTA AATGGAGAGG TTTAATGCTG GATTTATCAC GTCATTTCTT CGATAAAAAT
TATATTCTGA CTACAATTGA TCGTTTGGCA ATGCACAAAA TGAATGTTTT GCATTTGCAT
TTAGTAGACG ATCAGGGCTG GAGAATCGAA ATTAAAAAAT ATCCAAAACT AACAGAAGTC
GGAGCCTGGA GAGTTGATCA GGAAAACTTG TCTTGGAACG CCAGACTTGC TGTAAGTGCA
GATCAAAAAG GAACTTACGG GGGATTTTTT ACGCAGGACG AATTAAGAGA AATTGTAAAA
TATGCTGCAA CAAAAGGCAT CGAAGTAATT CCTGAAATCG AAATGCCTGC TCACGTAAGC
AGTGCCATTG CATCATATCC TGAACTGGCT TGTTTTGATC AGAAAATTGG AGTTCCTTCT
GGCGGAGTTT GGCCTTTAAC AGATATTTAT TGTGCAGGAA AAGAAACTAC GTTTGAGTTT
TTACAAAATG TAATCGATGA AGTAATTACC ATTTTCCCTT CAAAATATAT TCATATTGGA
GGAGATGAAG CGACTAAAAC CAATTGGGCA AAATGTCCGC ACTGCCAAAA AAGAATTAAA
GATGAACACT TAAAAAGTGT AGACGAATTA CAAAGTTATT TTGTAAAACG TATGGAAAAA
TACATCAATT CTAAAGGCAA AAAAGTAATT GGCTGGGATG AAATTTTAGA AGGAGGTCTG
GCTCCGGATG CAACAGTAAT GAGCTGGAGA GGAACAAAAG GCGGAATTGA AGCGGCAGAT
CAGGGACACG ATGTTATTAT GACTCCTGAA ACACCTTGTT ATTTCAACTT TTATCAAGGT
CCGCAAAACG AAGAACCTTT AGCTTTTGAT GCTTATAACC CGTTAAATGA AGTTTACAAA
TTTGATCCTG TAGTGCCGAC TATGACTCCT CAGGAAGCTG GACACGTTTT AGGCGGACAG
GCAAATTTAT GGGCAGAACA TATTTCTGGG CCAAAAGATT CTGAGTATAT GATTTTTCCA
AGATTAGCCG CGTTATCAGA AACATTATGG AGTCCGAAAG AAAAGCGTAA TTGGAATGAT
TTTACAACAA GATTATTCTC AATGTTCAAG CGTTATGATT ATCAAGGATT AAATTATGCA
AAAAGCGCTT ATTTGGTAAC CGCTTCTTCT ACTGCAGATT TAGCTAACAA ACAAGTGAAA
GTGGAATTAA AGAATGAATT TCCAAATCCG GATATCCGTT ATGTTTTAGG AGATAAAAAT
ATAGATCATC ACGCTGTAAA ATATACAAGT CCAATTGAGT TTAAAGAAAC AACTGTTTTA
AAAGCTTCTT TGTTTCAGGA TGAAAAACCA GTTGGAAAAA CATTCACAGA CACGATTATT
TTCCATAAAG CTGTTGCACA CAAAGTTAAG TACTTAACGC CTTTTAATCA AAGTTACAAA
GGAGATGCCA ATACGATGGT TAATACAATT AGAGGAAGTA AAAATTTCCA TGACGGACAA
TGGCAGGCTT GGCTTGTAAA CGATATGGAG CTGGTAATTG ATTTCGAAAA ACAGGAAAGT
ATCGAGCAGG TAATCGTAGG AACTTTAGAA AGTCAGGGCG CTGGAGTTAA TTTTCCAATC
GAAGTAAAAG TACTGGTTTC TAATGACGGA ATTAAATACA AGCAAGTTGG AAAAATAACA
CGTCCGTATG CAGTAAATGC TGTTCCTGAA CTGAAAGATT TTAAAATCAA TTTTCAGAAA
CAAAACGCAC GCTTTGTTAA AGTGATTGCA GGCAACTTAA AGAAAAGTCC TAAAGGAGAA
AGCTCTTGGT TATTCGTAGA TGAAATTCTA GTAAACTAA
 
Protein sequence
MRIIKSYLII GFLALVTSSY AQKVFTEKDI RIIPKPTQTL IKTGVFEFNK DTKFVTGNDF 
QKDAANALAS KLAIAAGWKP ETTTKAPASN FVQFKTDPNL KNEAYILDVN PNSIVISAKG
NTGFLYGLES IRQLLPEAIE SQYAVTSAKW QIPSLTINDE PRFKWRGLML DLSRHFFDKN
YILTTIDRLA MHKMNVLHLH LVDDQGWRIE IKKYPKLTEV GAWRVDQENL SWNARLAVSA
DQKGTYGGFF TQDELREIVK YAATKGIEVI PEIEMPAHVS SAIASYPELA CFDQKIGVPS
GGVWPLTDIY CAGKETTFEF LQNVIDEVIT IFPSKYIHIG GDEATKTNWA KCPHCQKRIK
DEHLKSVDEL QSYFVKRMEK YINSKGKKVI GWDEILEGGL APDATVMSWR GTKGGIEAAD
QGHDVIMTPE TPCYFNFYQG PQNEEPLAFD AYNPLNEVYK FDPVVPTMTP QEAGHVLGGQ
ANLWAEHISG PKDSEYMIFP RLAALSETLW SPKEKRNWND FTTRLFSMFK RYDYQGLNYA
KSAYLVTASS TADLANKQVK VELKNEFPNP DIRYVLGDKN IDHHAVKYTS PIEFKETTVL
KASLFQDEKP VGKTFTDTII FHKAVAHKVK YLTPFNQSYK GDANTMVNTI RGSKNFHDGQ
WQAWLVNDME LVIDFEKQES IEQVIVGTLE SQGAGVNFPI EVKVLVSNDG IKYKQVGKIT
RPYAVNAVPE LKDFKINFQK QNARFVKVIA GNLKKSPKGE SSWLFVDEIL VN