| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2030 |
|---|
| Symbol | |
|---|
| ID | 5094391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2383576 |
|---|
| End bp | 2384289 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644741455 |
|---|
| Product | LytTR family two component transcriptional regulator |
|---|
| Protein accession | YP_001194380 |
|---|
| Protein GI | 146299789 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAA AATGTTTGAT TATTGACGAT GAGCCATTGG CAATCAATGT TATTAAAAAT
TACTTAGAGC CGCTTGAAAA TTTTGAGGTA GTAAATACTT TTAGTAACCC GATTGAAGGC
TTGAATTTTT TGAAGAATAA CAAAGTTGAT GTTATTTTTC TGGATATAAA CATGCCGGTT
CTTGACGGAA TTAATTTTAT AAAAAGTCTC GAAAATCCGC CTTTATTAGT AATTACAAGC
GCCTATAGTC AGTTTGCAAT TGAAACTTAT GAATTGGACG TTTTAGATTA TCTGGTAAAA
CCAATCGAAT TTCCAAGATT AATGAAAACG CTCAATAAAA TCAGCAAGAG GTTAGAAAAC
AAGGCTTCTT CTCCGCAGGA AAGCAATCCA GACAGCCCTT TTATTTTCGT AAAAATTGAC
AAAAAGAGAA TGAAGAAAAT TTTCTTCAAC GAAATTCTGG TTATCGAAAG CCTTAAAGAT
TATTTAAAAA TCAACACCAC TACAGGTAAA TATATTATTC ACAGCACATT ATCTGACTTT
ACAGATTTAC TGCCAGAAAA AAACTTCCTG AGAATCCACA GATCTTACAC CATTGCAATC
GATAAAATCG ACGCAGTTGA AGGAAACAGC ATTGAAATTG AAGGACTTCG ATATGTGATT
GGAAGATCGT ATATCGATCA TGTAAAACAG AGAATTTTAA ATTCTTCTAT TTGA
|
|---|
| Protein sequence | MRIKCLIIDD EPLAINVIKN YLEPLENFEV VNTFSNPIEG LNFLKNNKVD VIFLDINMPV
LDGINFIKSL ENPPLLVITS AYSQFAIETY ELDVLDYLVK PIEFPRLMKT LNKISKRLEN
KASSPQESNP DSPFIFVKID KKRMKKIFFN EILVIESLKD YLKINTTTGK YIIHSTLSDF
TDLLPEKNFL RIHRSYTIAI DKIDAVEGNS IEIEGLRYVI GRSYIDHVKQ RILNSSI
|
|---|
| |