Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2028 |
Symbol | |
ID | 5094389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2379024 |
End bp | 2381138 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644741453 |
Product | Alpha-L-fucosidase |
Protein accession | YP_001194378 |
Protein GI | 146299787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACC GTACGATGAA AAACATTTTT CTTTTCTTGT GTTCTCTATG TATCACAATT TCTGCAAACA GTCAAAATAC TGTAAAAGCT CCGGAACCTT TTGGTCCGCT TCCTACACAA AAACAAATGG ACTGGCAGGA AATGGAATTT TATGCTTTTG TACATTTTTC ATTAAATACA TTTACCAATA AAGAATGGGG TTACGGAGAC GAATCTCCAG CTCTCTTTAA CCCGACAAAT TTAGACGTTC GCCAATGGGC GCGTATTGTA AAAGCGGCCG GAATGAAAGG AATTATTTTG GTAGCCAAAC ATCACGACGG ATTTTGTTTA TGGCCGTCGG CGTATACAGA ACGTTCTGTG AAGAATTCTC CGTGGAAAAA CGGGAAAGGT GATTTGGTTA AAGAATTGGC AGAAGCCTGT AAAGAATACG ATTTAAAATT AGGATTATAT CTTTCTCCCT GGGACAGAAA CCGTGCAGAT TATGGCAAGC CGGAATATAT TACCTATTTC AGAAACCAGC TGAAAGAATT ATTGACCAAT TACGGAGATG TTTTTGAAAT GTGGTTTGAC GGTGCAAACG GCGGTGACGG TTATTACGGC GGAGCCAATG AAACAAGAAA AATCAATACA CTTGAATATT ACAATTGGGA TGAAACCTAT AAATTAATAT ACAAAACTGC ACCAAAAACT TTGGTTTGGG GCGTTGGCCC TTCTGAAGCC AGATGGATTG GAAATGAAGA AGGCCGTGCC GGAAAAACAA ACTGGTCACT TTTACGCCAA AAAGATGAAT TGGCCGGAAA AGTACATTAT ACCGAATTTA TGTCGGGGCA TGAAGACGGA GAAAAATGGG TTCCTGGCGA AGCCGATGTT TCGATCAGAC CAGGATGGTT TTATCATTCA GTTGAAGATG ATAAAGTACG TCCGCTGGAT GAAATGGTCG ATATTTATTA CGAATCAATT GGGCGAAATG CCACTTTATT ATTAAATCTT CCGGTTGACA GGAGAGGTTT GGTTCACGAA AATGACGAAG CCAGATTAAA AGAATTGGTA GCGACTGTAA AAGCTGATTT TAAAACCGAA TTATTATCTA AAACAAAAAT TACGGCTGAT AATGTTAGAG GCAGCAGCGA AACATTTGCA GGAAAAAATG CTGTCGATGG AAATAAAAAT ACCTATTGGG CAACAGACGA CAATGTTAAA ACGGCTTCAA TAACTTTTGA GTTTGATAAA CCAACTGATA TAAACCGAAT TTTACTTCAG GAATATATTG CACTTGGACA GCGTGTAAAA GCTTTTAATG TTGAGGTTAA AGTTGATGGA AACTGGAAAA CTGCTGCAAA CGAAACTACA ATTGGTTACA AAAGAATTTT AAGAATCGAC CGGGTTAAAG CATCGGCATT AAGAATCAAT ATCACAGATT CAAAAGCAAA CATTGTTATT TCAAATATTC AGGTTTACAA TGCACCGACT TTTGTGCGTA TGCCGGAAAT CAGCCGTGAT AAAAACGGCG ATGTTACGAT TAAATCTCAA GATGGAAATC CTGTTTATTA TTCGCTTGAC GGAAAAAATC CAACGAAAAA AAGCACCTTA TATAAAGGAG TATTTCGAGT TAAGAAAGCG GTTACCATAA AAGCTGTAGC AATTGATGCT GTAGAAAATA TTAGCAGCGC AGTAAAAACA GCAAAATACG GCGCATCAAA AGAAAACTGG AAAATAGTTT CGGCTTCAAG CGGAGATTTA AAATCAGCTG ATCGTGTTAT CGACGGAAAT CCAGATACAG ATTGGAGTTT TGGCAATGAT CAAAACAAAC TTCCACAGGA AATAATTATA GATATGGGAA GCCTTTTAAA CTTAAACGGA TTTACTTATA TACCGCAGCA AGTAGGAAAC AATCTTAATT TAATTTCAAA TTATGAATTC TACACAAGCA CTGATAATAT AAACTGGACA TTGCAGTCTG AAGGTGAATT TTCGAATATT AAACACAACC CAATCGAACA GATTAAGACT TTCAAAAAAG CCAAAGCCAG ATATATTCGT TTCGTTGCCA AGTCAGCAGT GGCAAAGGGA TCGACTGTTT CTATTGCAGA ATTAAATGTT ATCGAAACAT TATAA
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Protein sequence | MNHRTMKNIF LFLCSLCITI SANSQNTVKA PEPFGPLPTQ KQMDWQEMEF YAFVHFSLNT FTNKEWGYGD ESPALFNPTN LDVRQWARIV KAAGMKGIIL VAKHHDGFCL WPSAYTERSV KNSPWKNGKG DLVKELAEAC KEYDLKLGLY LSPWDRNRAD YGKPEYITYF RNQLKELLTN YGDVFEMWFD GANGGDGYYG GANETRKINT LEYYNWDETY KLIYKTAPKT LVWGVGPSEA RWIGNEEGRA GKTNWSLLRQ KDELAGKVHY TEFMSGHEDG EKWVPGEADV SIRPGWFYHS VEDDKVRPLD EMVDIYYESI GRNATLLLNL PVDRRGLVHE NDEARLKELV ATVKADFKTE LLSKTKITAD NVRGSSETFA GKNAVDGNKN TYWATDDNVK TASITFEFDK PTDINRILLQ EYIALGQRVK AFNVEVKVDG NWKTAANETT IGYKRILRID RVKASALRIN ITDSKANIVI SNIQVYNAPT FVRMPEISRD KNGDVTIKSQ DGNPVYYSLD GKNPTKKSTL YKGVFRVKKA VTIKAVAIDA VENISSAVKT AKYGASKENW KIVSASSGDL KSADRVIDGN PDTDWSFGND QNKLPQEIII DMGSLLNLNG FTYIPQQVGN NLNLISNYEF YTSTDNINWT LQSEGEFSNI KHNPIEQIKT FKKAKARYIR FVAKSAVAKG STVSIAELNV IETL
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