Gene Fjoh_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2022 
Symbol 
ID5094383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2370733 
End bp2371905 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content38% 
IMG OID644741447 
Producthypothetical protein 
Protein accessionYP_001194372 
Protein GI146299781 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3934] Endo-beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.171892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TAAAATTGTG TCTGACATTT ATGTTGGCAG GATTAGTATT GCTAAGCTGC 
AACAACAAAA AAAGTAATTC TGAAGAGAAA AAAAATGAAA CTGCTGTAAT CGAAAAAAGA
GAAATCTGGA CAAAAGACCA GGCCAATAAA TGGTACGCAG AACAGCCTTG GTTAGTGGGC
GCAAATTATT ATCCTAGCAC AGCTGTAAAT CAATTAGAGA TGTGGCAGGA AGATACTTTT
GACCCCAAAA GAATCGATCA GGAATTGGGC TGGGCAGAAA ATTTAGGCAT GAATGTAATG
CGCGTTTACC TGCACGATTT ATTGCACAAG CAAGATGCAG AAGGGCTTTA CAAACGTATG
GATCAGTTTC TTGAAATCGC AGACAAACAT CACATTGAAA CCCTTTTCGT TTTATTTGAT
TCCTGCTGGG ATCCGTTTCC TGCTTTAGGA AAACAGCGCG CTCCAAAACC ATTCAAACAC
AATTCAGGCT GGGTGCAGAG TCCGGGACAA AAAGTACTGC AGGATTCTAC ACAATATCCT
CGTTTAGAGA AATATGTAAA AGAAACGGTT GCCAAATTTA AAGATGACAA ACGTATTCTG
GGCTGGGACG TTTGGAACGA GCCGGATAAT ATGACAGGAC CTTCTTATGA AAAAGTAGAA
ATCAAAAACA AAGTCGATTT AGTTCTGCCT CTTTTAAAAA ATGTTTTTGT GTGGGCAAGA
GAAAGCAATC CTTCACAGCC TTTAACTTCT GGAGTTTGGG TTGGAGACTG GAGCGATGAA
GCGAAAATGA AACCAATGCA CAAAATGCAG ATTGAACAAT CAGATGTAGT TTCTTTTCAC
AACTACAATA CACCACAAGA TTTCGAAAAA GTAATCAAAC AATTACAGCG TTACGGAAAA
CCTTTATTGT GTACAGAATA TATGGCTAGA CCAAACGGAA GTACTTTCGA AGGATTTTTA
CCAGTAGCTA GAAAATACAA TGTGGGCATG ATTAACTGGG GATTTGTTGA CGGAAAAACA
CAAACCAAAT ATGCCTGGGA CAGCTGGACG AAAGAATACA GTTCAGAACC AAAATTATGG
TTTCACGAAG TATTACACAC AGATGGAACA CCATACATAA AAGCTGAAAC AGATTTGATT
AAAAAAATGA CAGCAGAAGC GAATAAGAAA TAG
 
Protein sequence
MRKVKLCLTF MLAGLVLLSC NNKKSNSEEK KNETAVIEKR EIWTKDQANK WYAEQPWLVG 
ANYYPSTAVN QLEMWQEDTF DPKRIDQELG WAENLGMNVM RVYLHDLLHK QDAEGLYKRM
DQFLEIADKH HIETLFVLFD SCWDPFPALG KQRAPKPFKH NSGWVQSPGQ KVLQDSTQYP
RLEKYVKETV AKFKDDKRIL GWDVWNEPDN MTGPSYEKVE IKNKVDLVLP LLKNVFVWAR
ESNPSQPLTS GVWVGDWSDE AKMKPMHKMQ IEQSDVVSFH NYNTPQDFEK VIKQLQRYGK
PLLCTEYMAR PNGSTFEGFL PVARKYNVGM INWGFVDGKT QTKYAWDSWT KEYSSEPKLW
FHEVLHTDGT PYIKAETDLI KKMTAEANKK