Gene Fjoh_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2014 
Symbol 
ID5094376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2355880 
End bp2357388 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content38% 
IMG OID644741440 
Productaminotransferase, class V 
Protein accessionYP_001194365 
Protein GI146299774 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATG AAATGGATAC TATTTTGAAT ACAAAACCAA GCGAACTCGA AAACTATTTT 
TCTGAATTTA GAGAAAATAC AATTGGAGTC AATCACAGTT TCGAGTCGAT TTACGGCCCG
CAGAATATTC TGTATGCAGA CTGGATTGCC AGTGGAAGAT TATATTTCCC GATTGAAGAT
ATTATGCTTC GAAAAATTGG TCCAATGATC GCCAATACGC ACTCTTTTTC CAGCCAGACC
GGAAAAGCTT CGACTTATGC CTATCAGCAC GCAAGAGAGT TGATAAAAAA GCATGTAAAC
GCAAATGAAT CCGATTGTCT TGTAGCAACA GGAACCGGAA TGACGGCTGC TTTAAATAAA
TTGCAGCGTA TTATGGGACT GCGTTCTCAG GACAATATTT TCAATGTAAA AATCAATTTT
GATAATGAAA GGCCGGTAGT TTTTATCACA CACATGGAGC ATCATTCCAA TCAGGTTCCG
TGGTACGAAA CCATTGCCGA TGTTGTGGTT TTACCCTGCG GAAAAGACAA TTTAGTCGAT
CCGGAGATAT TGGCCGAAGA AATCAAAAAA TACGAAAACA GAACGCTTAA AATTGGCTCA
TTTACCGCTT GTTCAAACGT TACGGGAATT ATTACGCCGT ATCATGAATT AGCCAAAATA
ATGCATCAAA ACGGCGGTTA TTGTTTTGTA GATTTTGCAG CGTCGGCGCC GTATGTTTCA
ATTGATATGC ATCCGGAAGA TCCCGAAGAA CAATTGGATG CTATTTTCTT TTCGCCCCAT
AAATTTCTGG GCGGCCCCGG AACGTGCGGC ATTTTAATTT TCAATGAAAA ATTATACCAA
TCCAGTTTTC CGGATAATCC GGGCGGAGGA AATGTAAAAT GCACCAATCC GTGGGGCGGA
TACCATTACA GCGATGCTAT TGAAGTAAAA GAAGATGGCG GAACACCGGG ATTTCTGCAG
GTTATGCGAA CTGCTTTGTG TCTGGAACTG AAAAATAAAA TGAACGTTCA AAACATGAAA
AACAGAGAAA AAGAACTGCT TGATCTTTGT TTTCTTGAAT TGCAGAAAAT AAAAGGTTTA
ACCATTCTGG GAGATTTAAA AACAGAAAGA ATTGGCTGCG TTTCGTTTAC GATCGAGAAT
ATTCATTACA ATTTAATCGT ACGATTATTG AATGACCGTT TTGGAATTCA GGTTAGGGGC
GGGTGGTCTT GTGCCAGTAC ATACGCTCAT TTTTTATTGA ATATTGATGA AGAAAAATCA
ACCGAAATCA CAAACGGAAT CCTTCAGAAA AATTTAACCG AAAAACCGGG CTGGGTAAGA
GTTTCACTTC ATCCAACCAT GAAAAATGAT GAACTTTTAT TTATTTGTAA AGCCGTTGAA
CAAATCGTTT TAAATATTCA GGATTGGCAG AAAGCGTATC AATATAATCC TGTAACCAAC
GAATTTGATA ATCTTTTGGT AAAAGAAACC ATTGAAGACG ATGTCAAAAG TTGGTTTTCT
TTGGCTTAG
 
Protein sequence
MINEMDTILN TKPSELENYF SEFRENTIGV NHSFESIYGP QNILYADWIA SGRLYFPIED 
IMLRKIGPMI ANTHSFSSQT GKASTYAYQH ARELIKKHVN ANESDCLVAT GTGMTAALNK
LQRIMGLRSQ DNIFNVKINF DNERPVVFIT HMEHHSNQVP WYETIADVVV LPCGKDNLVD
PEILAEEIKK YENRTLKIGS FTACSNVTGI ITPYHELAKI MHQNGGYCFV DFAASAPYVS
IDMHPEDPEE QLDAIFFSPH KFLGGPGTCG ILIFNEKLYQ SSFPDNPGGG NVKCTNPWGG
YHYSDAIEVK EDGGTPGFLQ VMRTALCLEL KNKMNVQNMK NREKELLDLC FLELQKIKGL
TILGDLKTER IGCVSFTIEN IHYNLIVRLL NDRFGIQVRG GWSCASTYAH FLLNIDEEKS
TEITNGILQK NLTEKPGWVR VSLHPTMKND ELLFICKAVE QIVLNIQDWQ KAYQYNPVTN
EFDNLLVKET IEDDVKSWFS LA