Gene Fjoh_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2012 
Symbol 
ID5094374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2350825 
End bp2353614 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content36% 
IMG OID644741438 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001194363 
Protein GI146299772 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ACATCCTTCT GGGCTATTGC TCACTAGCAT TCTGCACGCT TGTTTCTGCG 
CAGAATAAAT CAGTTAACTT CAAGAAAATA AAAGAATTAG GCGGAATAGA AGAATATTTA
TATCAGCCAA ACGGCATGAA TGTTTTGCTT TTGCAGGACA ATGCTTCACC TGTTGCAACA
GTGCAGATTG TATATCGTGT AGGTTCTAAA CATGAGGTTT TAGGAAACAC AGGATCGACA
CACCTTTTAG AACATTTAAT GTTTAAAGGA ACGCCGAGTT TCAACAAAAA AAACGGAAAC
ACCATTACAG ATGTTTTGCA AAATACAGGA GCGCAGTTAA ACGCTACAAC CTGGTATGAT
CGTACCAATT ATTTCGAAAC ACTTCCAAGC GATAAAATCG AACTGGCACT TCAAATTGAA
GCCGACAGAA TGCGTAATTC TTTATTATTA AAAGAAGATA AAGAAGCCGA AATGACTGTT
GTACGTAACG AATTTGAACG CGGTGAAAAC AATCCAAATA GTTTATTAGA CAAAGAGATC
TGGGCTTCGG CATACATTGC ACACCCGTAT CATCACTCCA CAATTGGATG GAAATCGGAT
ATCGAAAATG CACCAATCGA GGTTTTACGT AATTTCTATA ATACCTATTA CTGGCCGGAT
AATGCCACTT TAACCATTAT TGGAGATTTT AAAAAAGACA ATGTTTTTGA CTTAATCGAA
AAGTATTTCG GTAAAATTAC AAAAGCACCA AACGCGATGC CGCAGCCTTA TACGCAGGAA
CCGCAGCAAT ATGGCGCGCG AAAAATTGTA GTGAGAAAGC CGGGAGAATT AGGCGTAATA
AACAAAGCTT ATAAAATTCC GGGCGCTTTA CACGAAGACC TTCCTGCTTT AAATATTTTG
GGAGAAATTA TAGGTTCCGG GCCGTCTGCA ATTTTAAATA AAACTTTCGT TGACAGCCGT
TTAGGAATTT ATACGTATGC AAGTGCAACA AATTTCAAAG AAGTCGGTCT TTTTACCATT
GGAGTTGGTT TTCCAACCTC ATCAAAACAT GAAGATATCG ATGCAAAAAT CAGCGAAGTG
GTAGCAAAAA TCCAAAAAGA AGGCGTAACA CAAGATGAGG TAAACAGAGT AGTTGCCAAA
ATTAGTGCAC AGACCATTTT AGCAAGAGAC GGTTCTGGAG TAATTGCATC AGAATTAAAC
GAAGCCATTG CAGCCGGCGA CTGGACAGAT TATGTAACAG GAGTTGACAG ATTGAAAAAA
GTAACTCCGG CAGATGTTCT TCGCGTAGCA CAAAAATATT TAGTTGAAGA CCAAAGCACA
ACAGGTTATT TTATTCCGAA ACAATCAGGA AACCAAAATC AGGATACTGC AAAAGCAAAC
AACTTTATTC CTGAAAACGG ACCGTTTTAT TACAGACATT CAGAAGATGG ACATGTACAC
GAAGAATCAG AATCAGCTGT TTCATCAGAA CAAAAAAATA CAACAGAAAT CGCTTATGAT
GATACAATAA TCGAAAAAAC AGCTTCGGCT TACAAAAGAG AAAAAGTATC AGCAATTGAT
GTCATTTCGG TAAAAACTTC GGCTAAAGAT TTCGTAACCG TTGCAGCAAG TATTTCGTTA
GGAAATTATG CAAATGAAGG AAAAAACAAT ATGATTCCGT CTTTAACAGC GTCAATGTTA
TCAAAAGGAA CTACGTTAAA TGACAAGTTT AAATTCTCTG AAAAACTCCA AAAATTGGGC
GTAAACTTAA GCGTAAATGC CTCAACTTTT AAAATCAATA TTGGATTTAA ATGCTTGAAA
AAAGATTTAG ATCAGGTAAT TACTTTACTG GCAGAAGAAT TAAGAAATCC TTTGTTTGAT
GCCAAAGAAT TTGAAAACTT AAAACAGCAG TTTATCGGGA ATACACAGCA GGATTTAAAC
GATCCGGGCG AAAGAGGAAG CATTGCATTA TCGCAGGCTA TTTATCCAAA AGCAAATCCA
AATTACAGTT TAAGTGTTGA AGATTACATC GCGAATATTA AAAACGCATC TTTAGACGAA
GTAAAAGCTT TTCATAAAAA ATATTTCGGA TCGGCTTCAA TGCATTTAGT TATTGTAGGC
GATACAGAAG GATCTAATTT AAATGCTTCT TTAAAAAAAT CATTCAAAAA CTGGAATGGC
GGAGTAGTAG AAAACATGAA ATTTGAAGAA GCAGTAAAAT CCAATTCAAA AACAGAAGTA
TTAACAATTC CGGAAAAACC AAGTGCCGAA TTATTCATTG GGCAATACAC AGGTTTAAAA
AGAACTGATG CCGATTATAT TCCGTTTTAC ATTGCTAACT ATACTTTAGG AGCAGGTTTT
GCCGGACGTT TAATGCAGAC TGTTCGTGAT AATGACGGAT TAACTTATAG TATTTCATCT
GGTTTAGGAG GAAATATTAC AACAGGTGGT TACTGGTTCG TAAACGCTTC TTTCAATCCG
GCATTATTTC AAAAAGGATT AGATGCTACA AAAGTTCAGG TAGATAAATG GGTTAAAGAC
GGAATCACCG CAACAGAATT AGAAAACAAG AAAACCAATT TAATTGGAAG TTTTAAAGTA
GGAATGTCAA CCACAAGCGG AATGGCAAGA ACTATTTTAA GTTTTGTAGA AAGAGGTCTG
GAGCCAAACT ATATAGAACA ATATCCAAAA GATATCGAAA AAGTGACTTT GCAGCAGGTA
AACGATGCTG TTAAGAAATA CATCCAGTTA GACAAAATGA TTATCATCAA AGCAGGTTCT
TTGGATAAAG ACGGGAATCC TTTGAAGTAG
 
Protein sequence
MKKHILLGYC SLAFCTLVSA QNKSVNFKKI KELGGIEEYL YQPNGMNVLL LQDNASPVAT 
VQIVYRVGSK HEVLGNTGST HLLEHLMFKG TPSFNKKNGN TITDVLQNTG AQLNATTWYD
RTNYFETLPS DKIELALQIE ADRMRNSLLL KEDKEAEMTV VRNEFERGEN NPNSLLDKEI
WASAYIAHPY HHSTIGWKSD IENAPIEVLR NFYNTYYWPD NATLTIIGDF KKDNVFDLIE
KYFGKITKAP NAMPQPYTQE PQQYGARKIV VRKPGELGVI NKAYKIPGAL HEDLPALNIL
GEIIGSGPSA ILNKTFVDSR LGIYTYASAT NFKEVGLFTI GVGFPTSSKH EDIDAKISEV
VAKIQKEGVT QDEVNRVVAK ISAQTILARD GSGVIASELN EAIAAGDWTD YVTGVDRLKK
VTPADVLRVA QKYLVEDQST TGYFIPKQSG NQNQDTAKAN NFIPENGPFY YRHSEDGHVH
EESESAVSSE QKNTTEIAYD DTIIEKTASA YKREKVSAID VISVKTSAKD FVTVAASISL
GNYANEGKNN MIPSLTASML SKGTTLNDKF KFSEKLQKLG VNLSVNASTF KINIGFKCLK
KDLDQVITLL AEELRNPLFD AKEFENLKQQ FIGNTQQDLN DPGERGSIAL SQAIYPKANP
NYSLSVEDYI ANIKNASLDE VKAFHKKYFG SASMHLVIVG DTEGSNLNAS LKKSFKNWNG
GVVENMKFEE AVKSNSKTEV LTIPEKPSAE LFIGQYTGLK RTDADYIPFY IANYTLGAGF
AGRLMQTVRD NDGLTYSISS GLGGNITTGG YWFVNASFNP ALFQKGLDAT KVQVDKWVKD
GITATELENK KTNLIGSFKV GMSTTSGMAR TILSFVERGL EPNYIEQYPK DIEKVTLQQV
NDAVKKYIQL DKMIIIKAGS LDKDGNPLK