Gene Fjoh_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2011 
Symbol 
ID5094373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2349575 
End bp2350711 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content34% 
IMG OID644741437 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001194362 
Protein GI146299771 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA CAATCTTAAA ATCGTCATTA ATTGTATTGG CACTTGCATC TGTAACTACT 
TCTTGCTCTA AAAAAGAAGG TTACACAATC AACGGTACTA TTGCCGGATT AGATAAAGGA
ATGGTTTATC TTGAAAACAC AGATGAAAAA GGAAATAAAC AAATAGCAGA TTCTGCACAA
ATTAAAGAAG GAGGAACTTT TACTTTTGAA GGAAAAGTTT CAGAACCTTT ACTATATACT
CTTAAATTAA AAGGAGAAGA TTATGGAGCT TTCTTTCTTT TAGAGAACGA AGACATTAAA
ATTGAAGCTA AAAAAGATTC TATTTTTAAA GCTAAAATCA GTGGAGCGCG GCAAAATGAT
ATTTACAAAT CATACTACGA TAACGAATTC AAAAAAATCC AGAATATCGC TGGTCCTGTT
TATAAATTAT CTGACTCCTT AACTCAAAAC GGAAAAGTAA AATTAACAGC TGAACAGCAA
ACCATGATGG ATAAAAAATG GAAAGATCTT GCCGCTTTTG CTGATGATTT AACCGATAAA
TACATCCGAA AAAATAAAGA TAAAGTAGGT GCTGCTTTAA TAATCAATGA CCGAATTGTA
TCGTATGGAA CTCCGGAACA GGTAAAAATG TATTATGCCG TTTTATCTCC AGACGTACAA
AAATCAATTT ACGGAAAACA GTTAAAAGAA GCCATCGACC TTAACGAAAA AACAGCAGTA
GGCGTTACAG CTCCAGAGTT TTCTCAAACC GATATTGACG GAAAAGTAGT GAATCTTTCA
GATTACAAAG GAAAATATGT TTTAGTTGAT TTTTGGGCTT CTTGGTGCGG ACCATGCCGA
AAAGAAAATC CAAACGTAGT TTTAGCTTAT AAAACCTATC ACGAAAAAGG ATTTGATGTT
TTGGGAGTTT CTTTAGATGA TAAAAAGAAC CTTTGGCAGA AAGCAATCGA AAAAGACGGT
TTAACCTGGA CTCATGTTTC TGATTTAAAA GGATGGCAGA ACGAAGCTGC TGTTTTATAC
GGAGTAAAAA TGGTGCCAAC GAATTACTTA ATTGGTCCAG ACGGAAAAAT CGTTGCTAAA
AACCTTAGAG AAGCAGAATT ACAATCTAAA CTAAAAGAAA TCTTCAGCAA ATCGTAA
 
Protein sequence
MKSTILKSSL IVLALASVTT SCSKKEGYTI NGTIAGLDKG MVYLENTDEK GNKQIADSAQ 
IKEGGTFTFE GKVSEPLLYT LKLKGEDYGA FFLLENEDIK IEAKKDSIFK AKISGARQND
IYKSYYDNEF KKIQNIAGPV YKLSDSLTQN GKVKLTAEQQ TMMDKKWKDL AAFADDLTDK
YIRKNKDKVG AALIINDRIV SYGTPEQVKM YYAVLSPDVQ KSIYGKQLKE AIDLNEKTAV
GVTAPEFSQT DIDGKVVNLS DYKGKYVLVD FWASWCGPCR KENPNVVLAY KTYHEKGFDV
LGVSLDDKKN LWQKAIEKDG LTWTHVSDLK GWQNEAAVLY GVKMVPTNYL IGPDGKIVAK
NLREAELQSK LKEIFSKS