Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1998 |
Symbol | |
ID | 5094360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2332661 |
End bp | 2333695 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644741424 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_001194349 |
Protein GI | 146299758 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAG ACAGCATTGA ACAAATTAAT TTCGATGAAA TTAATGAACT GGCGATTTCA AAGCCTTTAG TTTCTCATAT TTACACAGCC GATCCGTCGG CGCATGTGTT TAATGGTAAA ATTTATATTT ATCCATCGCA TGATATAGAT GCCGGAATTC CGTTTAATGA TAATGGAGAT CATTTTGGAA TGGAAGATTA TCACGTTTTT TCAATGGACA GTATTACAGC AAAAGCCGTA GATAATGGTG TTGCGCTTCA CGTAGATGAT GTTGCCTGGG CCGAAAAACA AATGTGGGCG CCAGATGCAG CACATAAAAA CGGAAAGTAC TATTTGTATT TTCCTGCCAA ACGTGCCAAT GGAATTTTCC AGATTGGAGC AGCGATCAGC GATTCTCCTT CCGGGCCTTT TGTACCTCAG CCAGATGCAA TAAAAGGAAG TTACAGTATT GATCCTGCGG TTTTTGAAGA TGAAGACGGA AAACATTATA TTTATTTTGG CGGTATCTGG GGCGGACAAT TGCAGAAATA CAGAAACAAT GTATACGACC AGAATAACGA AGAACCTTCT GAAAATGAAC CCGCTTTAGG ACCAATTGTA GCTTTGCTTC GCGACGATAT GCTTGAACTT GCAGAAGAAC CAAAAGAGAT TAAAATTTTG GATGAAAAAG GAGAAATCCT GCTAGCCGGC GATAATAACC GTCGTTTTTT TGAAGCTTCA TGGGTACATA AATACAACGG AAAATATTAT TTCTCATATT CAACAGGAGA TACCCATTTT ATTTGTTACG CTATTGGCGA TAATCCGTAT GGGCCATTTA CCTATCAGGG AAGAATTTTG AATCCTGTTG TGGGCTGGAC TTCTCATCAT TCTATTTGTG AGGTTGAAAA TGAGTGGTAT TTATTTTATC ATGATTCAAG TTTGTCAAAA GGCGTAACAC ATTTAAGAAG CATGAAAGTA ACTAAAATTG ATTATTTAGA AGATGGTTCG ATTGTAACAA TTGATCCGTA TGGAATAAGA AGATTAATTG ATTAG
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Protein sequence | MPEDSIEQIN FDEINELAIS KPLVSHIYTA DPSAHVFNGK IYIYPSHDID AGIPFNDNGD HFGMEDYHVF SMDSITAKAV DNGVALHVDD VAWAEKQMWA PDAAHKNGKY YLYFPAKRAN GIFQIGAAIS DSPSGPFVPQ PDAIKGSYSI DPAVFEDEDG KHYIYFGGIW GGQLQKYRNN VYDQNNEEPS ENEPALGPIV ALLRDDMLEL AEEPKEIKIL DEKGEILLAG DNNRRFFEAS WVHKYNGKYY FSYSTGDTHF ICYAIGDNPY GPFTYQGRIL NPVVGWTSHH SICEVENEWY LFYHDSSLSK GVTHLRSMKV TKIDYLEDGS IVTIDPYGIR RLID
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