Gene Fjoh_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1998 
Symbol 
ID5094360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2332661 
End bp2333695 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content38% 
IMG OID644741424 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_001194349 
Protein GI146299758 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3507] Beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAG ACAGCATTGA ACAAATTAAT TTCGATGAAA TTAATGAACT GGCGATTTCA 
AAGCCTTTAG TTTCTCATAT TTACACAGCC GATCCGTCGG CGCATGTGTT TAATGGTAAA
ATTTATATTT ATCCATCGCA TGATATAGAT GCCGGAATTC CGTTTAATGA TAATGGAGAT
CATTTTGGAA TGGAAGATTA TCACGTTTTT TCAATGGACA GTATTACAGC AAAAGCCGTA
GATAATGGTG TTGCGCTTCA CGTAGATGAT GTTGCCTGGG CCGAAAAACA AATGTGGGCG
CCAGATGCAG CACATAAAAA CGGAAAGTAC TATTTGTATT TTCCTGCCAA ACGTGCCAAT
GGAATTTTCC AGATTGGAGC AGCGATCAGC GATTCTCCTT CCGGGCCTTT TGTACCTCAG
CCAGATGCAA TAAAAGGAAG TTACAGTATT GATCCTGCGG TTTTTGAAGA TGAAGACGGA
AAACATTATA TTTATTTTGG CGGTATCTGG GGCGGACAAT TGCAGAAATA CAGAAACAAT
GTATACGACC AGAATAACGA AGAACCTTCT GAAAATGAAC CCGCTTTAGG ACCAATTGTA
GCTTTGCTTC GCGACGATAT GCTTGAACTT GCAGAAGAAC CAAAAGAGAT TAAAATTTTG
GATGAAAAAG GAGAAATCCT GCTAGCCGGC GATAATAACC GTCGTTTTTT TGAAGCTTCA
TGGGTACATA AATACAACGG AAAATATTAT TTCTCATATT CAACAGGAGA TACCCATTTT
ATTTGTTACG CTATTGGCGA TAATCCGTAT GGGCCATTTA CCTATCAGGG AAGAATTTTG
AATCCTGTTG TGGGCTGGAC TTCTCATCAT TCTATTTGTG AGGTTGAAAA TGAGTGGTAT
TTATTTTATC ATGATTCAAG TTTGTCAAAA GGCGTAACAC ATTTAAGAAG CATGAAAGTA
ACTAAAATTG ATTATTTAGA AGATGGTTCG ATTGTAACAA TTGATCCGTA TGGAATAAGA
AGATTAATTG ATTAG
 
Protein sequence
MPEDSIEQIN FDEINELAIS KPLVSHIYTA DPSAHVFNGK IYIYPSHDID AGIPFNDNGD 
HFGMEDYHVF SMDSITAKAV DNGVALHVDD VAWAEKQMWA PDAAHKNGKY YLYFPAKRAN
GIFQIGAAIS DSPSGPFVPQ PDAIKGSYSI DPAVFEDEDG KHYIYFGGIW GGQLQKYRNN
VYDQNNEEPS ENEPALGPIV ALLRDDMLEL AEEPKEIKIL DEKGEILLAG DNNRRFFEAS
WVHKYNGKYY FSYSTGDTHF ICYAIGDNPY GPFTYQGRIL NPVVGWTSHH SICEVENEWY
LFYHDSSLSK GVTHLRSMKV TKIDYLEDGS IVTIDPYGIR RLID