| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1991 |
|---|
| Symbol | |
|---|
| ID | 5094353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2323655 |
|---|
| End bp | 2324515 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 644741417 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001194342 |
|---|
| Protein GI | 146299751 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCA TTACACTTCC CGATGAAATG AATTTAGAAA AAACACAGCA AATACATGTT
GTGGATTACA GAAGTTCTAA AGATGTTTCG AAACAGCAGA TTATTCTAAA CCAGAATATA
ATTAGTTTTC TTATTGAAGG GACAAAAGAA GCTGTTTTCG ATAATGCGTC CTTGTCTATA
GATGCTTCTA AGTTTTTAAT AATGAGATCA GGAAATTGTT TAATGACAGA AAAAAGGATT
TCGGAAGCCT CAAATTATAG AAGCGTACTC TTGTTTTTTT CTAACGAAAT GATTCATAAT
TTCATTAGAA AAATGGAAAT AAATGATTTT GAATCAGTTG ACACCAAGTC TGTTTATGCT
TTTGATTATG ATGATTTCAT ACAAAGATTT GTACACAGCT TAGTAGATAT TTCTAAACTT
TCGGGAGAAA TAAAATCCAA ATTATTAGAA GTGAAGCTGG AAGAAATCAT GCTTTATCTT
ACCGAAAAGT ATGGAACAAA GTTTCTGTAC TCCTTAACTG TAAATAGTAA TAATGCTACG
CAAAAGTTTA TTCAGGTAAT TGAAAACAGT CATTTAAGTA AACTCACTTT AAAAGAACTG
GCATTTTTAT GTAATATGAG TATTTCAACA TTCAAAAGAG AATTTGAAAA ACATTACGCC
GAATCTCCAA TAAAATGGTT TCAAAACAAA AGACTGGAGT TTGCTCATTA TTTATTGCAG
CAAGAACAAA AAAATCCATC AGAAATATAT TTTGAAGTTG GTTACGAAAA CCTGTCCAGT
TTTACGCAGG CTTATAAATT AAAATACGGC GTAACGCCAA AACAAAATCA GAAAAACTGG
ACTTTTAGCA ACAGTTTTTG A
|
|---|
| Protein sequence | MHTITLPDEM NLEKTQQIHV VDYRSSKDVS KQQIILNQNI ISFLIEGTKE AVFDNASLSI
DASKFLIMRS GNCLMTEKRI SEASNYRSVL LFFSNEMIHN FIRKMEINDF ESVDTKSVYA
FDYDDFIQRF VHSLVDISKL SGEIKSKLLE VKLEEIMLYL TEKYGTKFLY SLTVNSNNAT
QKFIQVIENS HLSKLTLKEL AFLCNMSIST FKREFEKHYA ESPIKWFQNK RLEFAHYLLQ
QEQKNPSEIY FEVGYENLSS FTQAYKLKYG VTPKQNQKNW TFSNSF
|
|---|
| |