| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1966 |
|---|
| Symbol | |
|---|
| ID | 5091702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2279964 |
|---|
| End bp | 2281304 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644741387 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001194317 |
|---|
| Protein GI | 146299726 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.577995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTGA AGACCTTTTA TACGATAAAA CCCTTCGACT TCGCTCAGGG TGACAAAACA
GAAATAGAAA ACAAATTAAA AATGTTTGCT TTAGTCGATT GTAATAATTT TTATGCTTCC
TGCCAAAGGG TATTTGAACC GCATTTAAGA GAAAAACCTA TAGTTATTCT CTCTAATAAT
GACGGCTGTG TTATTTCGCG GTCTGATGAA GCTAAAGCTT TGGGCATACC AATGGCTATT
CCGGCTTTTA AATATGAATC TGTTTTTAAG GAAAAGAACA TTTTTGTGTA TTCTTCTAAT
TATCCTCTAT ATGGCGATAT GAGCAATCGG GTAATGAACC TGCTTCGAAC TTATACTCCT
GAAATCGAAA TCTACAGTAT CGATGAAGCT TTCTTAAAAT TTTCAGGTTA CGATTTATTT
GATATGAATA CCTTGGGTTT AAAAATGCGT AAAGAAGTCA CACAAGGAAC GGGCATTCCT
GTCAGCATAG GTTTTGCTTC TACTAAGGCT CTGGCTAAAA TGGCAAATAA AATTGCCCGA
AAATTTGCAG ATCGTACACA GAATGTTCAT TGTATTGATT CTGAAGAAAA AAGAGTTAAA
GCCTTAAAAT GGTCTAAAAT TGAAGATGTC TGGGGAATTG GAAGAAAACA CGCGAAACGT
CTTAAAGCAA AAAAAATTAA TACCGCTTAT GAATTTACTC AGCTTCCAGA TGCCTGGGTG
AGAAAAGAAA TGTCAGTAGT CGGGCTTAGG TTAAAGCATG AATTAGAAGG TAAACCAACT
TTAGAATTAG AAGAAGCTGC AGATCGTAAA ATGATCGCTA CAACAAGGTC TTTCGAAAAA
AGATATACCT CTTATGAAGA AATATCAGAG CGAATCAGCA CGTTTACGGC CTCGTGTGCC
GAGAAATTAA GACGACAAAA TTGTCATTGT AATATGGTGA CTGTTTTTAT CCAAACGAGT
TTTATAAAAA ATGAAGAATC ACACTATTCG AGAAGCATTA CGATTACAAC AGATTTCCCA
ACTAATTCGA CGATAGAACT TAATGCTGCA GCTCAAAAAG GATTTAAAGC TATTTTTAAA
AAGGGTTATC GCTATAAAAA AGCAGGCGTA ATTGTAATGG GCTTAACGCC AAACAGCGAA
ACACAGCTTA ATTTATTTGA AACTTCAAAT CCTAAGCATC AGCCTTTAAT GAGTGTTATC
GACAAAATGA ACCAAAATTA TGGTAATAAT AAAATTAAAT TTGGTGTGCA GTCTCTTGGA
AGACAATGGA AAATGAAACA AAACAGATTA TCTCCTAAGT TTTCTACCTC ACTTAAAGAC
GTTATTACTG TTAAAGCCTA A
|
|---|
| Protein sequence | MKLKTFYTIK PFDFAQGDKT EIENKLKMFA LVDCNNFYAS CQRVFEPHLR EKPIVILSNN
DGCVISRSDE AKALGIPMAI PAFKYESVFK EKNIFVYSSN YPLYGDMSNR VMNLLRTYTP
EIEIYSIDEA FLKFSGYDLF DMNTLGLKMR KEVTQGTGIP VSIGFASTKA LAKMANKIAR
KFADRTQNVH CIDSEEKRVK ALKWSKIEDV WGIGRKHAKR LKAKKINTAY EFTQLPDAWV
RKEMSVVGLR LKHELEGKPT LELEEAADRK MIATTRSFEK RYTSYEEISE RISTFTASCA
EKLRRQNCHC NMVTVFIQTS FIKNEESHYS RSITITTDFP TNSTIELNAA AQKGFKAIFK
KGYRYKKAGV IVMGLTPNSE TQLNLFETSN PKHQPLMSVI DKMNQNYGNN KIKFGVQSLG
RQWKMKQNRL SPKFSTSLKD VITVKA
|
|---|
| |