Gene Fjoh_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1964 
Symbol 
ID5091700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2277687 
End bp2278463 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content39% 
IMG OID644741385 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001194315 
Protein GI146299724 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0747161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CGACTTATAA CGTAAACGGA ATCAACGGAA GGTTAAATGT ATTACTTCGA 
TGGCTGGACG AAGCAGCTCC GGATATTGTG TGCTTACAAG AATTAAAAGC ACCTCAGGAT
AACTTTCCTC TTAAGGCTAT TAATGATGCA GGTTACAATG CCGTCTGGCA CGGACAAAAA
CAATGGAACG GTGTTGCTAT TCTTGCCCGA AATATGAAAA TAGAAGAAAT AACCCGCACA
CTTCCGGGTG ATGACGAAGA TGTTCAAAGC CGTTATATTG AAGCTTTAAT TAACGGAATT
GTAATTGCAT GTCTTTATCT CCCAAACGGG AATCCAGTGC CGGGACCAAA ATTTGAATAT
AAATTGAAAT GGTTTGATCG TCTGGCTGAG CGTGCAGCAA TATTATTATC CTTAAAAGTT
CCTGTACTAT TAATTGGTGA TTATAATGTC ATGCCAACAG AGCTGGATGT TTATAAACCT
GAAAAATGGA TAAATGATGC ACTTTTCAAA CCAGAAATTA GAAAAGCGTT TGCAGCTATA
GTTTCACAAG GATGGACAGA TGCGATTAGA ACATTGTATC CTGATGAGAA AATTTACACT
TTCTGGGATT ATTTCAGGAA TGCTTATCAG CGAAATGCAG GTCTTAGAAT CGATCATTTT
TTATTGAGTC CGCAAATAGC ATCGGCATTG CATTCCGGCG GTGTTGATCG TCATGTGCGA
GGCTGGGAAA AAACAAGCGA TCATGCACCT GTATGGATTC AAATTGACAA AAAATAA
 
Protein sequence
MKIATYNVNG INGRLNVLLR WLDEAAPDIV CLQELKAPQD NFPLKAINDA GYNAVWHGQK 
QWNGVAILAR NMKIEEITRT LPGDDEDVQS RYIEALINGI VIACLYLPNG NPVPGPKFEY
KLKWFDRLAE RAAILLSLKV PVLLIGDYNV MPTELDVYKP EKWINDALFK PEIRKAFAAI
VSQGWTDAIR TLYPDEKIYT FWDYFRNAYQ RNAGLRIDHF LLSPQIASAL HSGGVDRHVR
GWEKTSDHAP VWIQIDKK