Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1964 |
Symbol | |
ID | 5091700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2277687 |
End bp | 2278463 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644741385 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001194315 |
Protein GI | 146299724 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0747161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CGACTTATAA CGTAAACGGA ATCAACGGAA GGTTAAATGT ATTACTTCGA TGGCTGGACG AAGCAGCTCC GGATATTGTG TGCTTACAAG AATTAAAAGC ACCTCAGGAT AACTTTCCTC TTAAGGCTAT TAATGATGCA GGTTACAATG CCGTCTGGCA CGGACAAAAA CAATGGAACG GTGTTGCTAT TCTTGCCCGA AATATGAAAA TAGAAGAAAT AACCCGCACA CTTCCGGGTG ATGACGAAGA TGTTCAAAGC CGTTATATTG AAGCTTTAAT TAACGGAATT GTAATTGCAT GTCTTTATCT CCCAAACGGG AATCCAGTGC CGGGACCAAA ATTTGAATAT AAATTGAAAT GGTTTGATCG TCTGGCTGAG CGTGCAGCAA TATTATTATC CTTAAAAGTT CCTGTACTAT TAATTGGTGA TTATAATGTC ATGCCAACAG AGCTGGATGT TTATAAACCT GAAAAATGGA TAAATGATGC ACTTTTCAAA CCAGAAATTA GAAAAGCGTT TGCAGCTATA GTTTCACAAG GATGGACAGA TGCGATTAGA ACATTGTATC CTGATGAGAA AATTTACACT TTCTGGGATT ATTTCAGGAA TGCTTATCAG CGAAATGCAG GTCTTAGAAT CGATCATTTT TTATTGAGTC CGCAAATAGC ATCGGCATTG CATTCCGGCG GTGTTGATCG TCATGTGCGA GGCTGGGAAA AAACAAGCGA TCATGCACCT GTATGGATTC AAATTGACAA AAAATAA
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Protein sequence | MKIATYNVNG INGRLNVLLR WLDEAAPDIV CLQELKAPQD NFPLKAINDA GYNAVWHGQK QWNGVAILAR NMKIEEITRT LPGDDEDVQS RYIEALINGI VIACLYLPNG NPVPGPKFEY KLKWFDRLAE RAAILLSLKV PVLLIGDYNV MPTELDVYKP EKWINDALFK PEIRKAFAAI VSQGWTDAIR TLYPDEKIYT FWDYFRNAYQ RNAGLRIDHF LLSPQIASAL HSGGVDRHVR GWEKTSDHAP VWIQIDKK
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