Gene Fjoh_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1963 
Symbol 
ID5091699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp2277052 
End bp2277678 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content36% 
IMG OID644741384 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001194314 
Protein GI146299723 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0550839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAT TTAACGACAC CGAATTATTT ACCACAGGTT TGGCAGGAAA AAAAGTATTT 
GACATTCCTG ATTCTGAATT GATTTTAATT GATAATTTCT TCACAAAAGA AGAATCTGAT 
CGTTTTTATG AAAGACTGCT TCGCAAAACG AAATGGAGAG AATACGAAAT GGAAATTTAT 
GATAAAACCT ATACTGTTCC CAGAATGATT GCCTGGTATG AAGATAAAGA TAATCCGGGA 
GCAGATTTAA AAGGTCCTGA CTGGAATTAT GAATTGCTGA CTATTAGAGG ACGTGTAGAA 
AAGGAAACAC AGCAGGATTT TAATACTGTA CTGCTTAATT TGTACAGAGA TGGAAATGAT 
GGCGTAGGTT GGCACAGCGA TAAAGAACAT AATACGGGAC CCAACCCAAT TATTGCTTCG 
GTGACTTTTG GAGAAACCAG AATGTTCAGG CTGCGTCATA AATACAGTAA AGAAATTCCG 
CAGATCGAAA TTCCGTTACA TCATGGGTCT TTTTTGCTGA TGGCAGGAAC TACAAACAGT 
TTTTGGCAGC ATCAAGTTCC CAAAACAGCA CGAAATGTTT TACCAAGAAT AAATTTAACT 
TTTAGACAAA CACACAGAAA TCTGTAA
 
Protein sequence
MTLFNDTELF TTGLAGKKVF DIPDSELILI DNFFTKEESD RFYERLLRKT KWREYEMEIY 
DKTYTVPRMI AWYEDKDNPG ADLKGPDWNY ELLTIRGRVE KETQQDFNTV LLNLYRDGND 
GVGWHSDKEH NTGPNPIIAS VTFGETRMFR LRHKYSKEIP QIEIPLHHGS FLLMAGTTNS 
FWQHQVPKTA RNVLPRINLT FRQTHRNL