Gene Fjoh_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1954 
Symbol 
ID5091690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2266712 
End bp2267866 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content34% 
IMG OID644741375 
ProductNLP/P60 protein 
Protein accessionYP_001194305 
Protein GI146299714 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTTA GATTAATTAT AGTATTGTTT TTTTTTAGTG TTGGTGTTTT TTCTCAGGAA 
AAATTTATCA AACATAAAAT TTCAAAAGGA GAAAACCTTA CTGTAATTGC TAAAAAATAT
GGAGTAAAGG CAAAAGACAT TCAAGAAGCG AATCCAAATG CTCCTAAAAT TTTAAAACTA
AATTCGGTTT TATTGATCCC GAATAAAAAT GTAAAGTCAG CTCAAAATTC TACACCATCA
ATAGCGAACA ATACTTCTGT AAATACTACT CCTGGTTCGC ACGAAGTTTT ACAAAAAGAA
ACACTTTGGG GAATCTCTAA AAAATACAAT GTTAGTGTTG ATGATTTGAA AAAAGCAAAT
CCTGCGCTGG AAACGGAGGG ACTGAAAATT GGACAGCAAA TCGTTATTCC AGTAAATACA
GCAGCCATTG CTGAAAATAC AGCTCCGGAA ACAGAAAAAC CGGAAATCAT TTCTTCTACA
GATGTTGACC TTGAGGTTAA AGTACAGCCA AAAGAAACAA AATACGCAAT CGCAAAAAAA
TACGGAATAA CAGTAAAAGA ACTGGAGCGT CAAAATCCTT CTATAAAAGC TAAACTTCCA
GTTGGATATG TTTTGAAAAT CAAAACAACA AAAGAGAAAG CAGATGCTGT AAATGCTTTG
AATGAACCTA AGACATTATT AGACGAAAGT TTTGGTTCTG AGCCTCAAAT TGCAGATAAT
AATACAGCAG TTAAAAAAGA TTCTACATTT GTTTATAATG GAAATCATTC TGGATTAATC
GACCAGATTA TTGTAAGTGC AACTGAAAAT ATTGGAACCC GTTATCGTTC AGGCGGTACT
ACAAAAGCAG GTTTTGACTG TTCAGGTTTA ATGTTCTGCA CTTTTGGAAA TTTTGATATA
AAACTGCCAA GAAGTTCAAT CGAACAATCT CGTATAGGAA CTAAAGTAGC TTCTGCAGAA
GCGCAAAAAG GAGATTTGAT TTTCTTTAAA ACTAACGGCA GACGTCATAT TAATCATGTA
GGAATGGTGG TTGAAGCAGC TGACGGAGAA ATTAAGTTTG TGCACTCATC AACACATGGC
GGAGTTATGA TTTCTTCTAC AAAAGAACCT TATTATCAAA GAACTTTTTC TCAGGTAAAC
CGTATTTTAG AATAA
 
Protein sequence
MVFRLIIVLF FFSVGVFSQE KFIKHKISKG ENLTVIAKKY GVKAKDIQEA NPNAPKILKL 
NSVLLIPNKN VKSAQNSTPS IANNTSVNTT PGSHEVLQKE TLWGISKKYN VSVDDLKKAN
PALETEGLKI GQQIVIPVNT AAIAENTAPE TEKPEIISST DVDLEVKVQP KETKYAIAKK
YGITVKELER QNPSIKAKLP VGYVLKIKTT KEKADAVNAL NEPKTLLDES FGSEPQIADN
NTAVKKDSTF VYNGNHSGLI DQIIVSATEN IGTRYRSGGT TKAGFDCSGL MFCTFGNFDI
KLPRSSIEQS RIGTKVASAE AQKGDLIFFK TNGRRHINHV GMVVEAADGE IKFVHSSTHG
GVMISSTKEP YYQRTFSQVN RILE