| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1940 |
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| Symbol | rplA |
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| ID | 5091676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2241505 |
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| End bp | 2242194 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741361 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001194291 |
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| Protein GI | 146299700 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.559759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAT TAACAAAAAA GCAAAAAGAG GCTGCTTCAA AAATTGAAAA GAACAAATTA
TACTCTCTAA AAGATGCTGC GGCATTATTG AAAGTTGTTG CTTCTGCAAA ATTTGATGAG
TCTGTTGATA TCGCAGTTCG TTTGGGTGTA GATCCAAGAA AAGCGAATCA AATGGTTAGA
GGTGTGGTAA CTTTACCTCA CGGAACAGGA AAGGATGTTA AAGTATTAGC ATTGGTTACT
CCAGACAAAG AGGCTGAAGC AAGAGAGGCT GGAGCAGATC ATGTTGGTCT TGATGATTAC
TTACAAAAAA TCAAAGACGG TTGGACAGAT GTTGATGTGA TCATTACTAT GCCTGCTGTT
ATGGGTAAAT TAGGTCCATT AGGTCGTATT TTAGGACCTA GAGGTTTAAT GCCTAACCCT
AAAACAGGTA CAGTAACTAT GGATGTTGCT AAAGCTGTTC AAGAAGTTAA AGCTGGTAAA
ATTGACTTTA AAGTTGATAA AACTGGTATC GTACACGCAG GAATCGGTAA AGTTTCTTTT
GGAGCTGAGC AGATTGTTGA CAACGCACAC GAAATTATTC AAACATTAAT AAAACTTAAA
CCAACTGCTG CTAAAGGTAC ATACATCAAA GGTATTCACC TTACAAGCAC AATGAGTCCT
GCTATTGCAT TAGACCCAAA AGCAGTATAA
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| Protein sequence | MAKLTKKQKE AASKIEKNKL YSLKDAAALL KVVASAKFDE SVDIAVRLGV DPRKANQMVR
GVVTLPHGTG KDVKVLALVT PDKEAEAREA GADHVGLDDY LQKIKDGWTD VDVIITMPAV
MGKLGPLGRI LGPRGLMPNP KTGTVTMDVA KAVQEVKAGK IDFKVDKTGI VHAGIGKVSF
GAEQIVDNAH EIIQTLIKLK PTAAKGTYIK GIHLTSTMSP AIALDPKAV
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