Gene Fjoh_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1936 
Symbol 
ID5093552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2238888 
End bp2240075 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content40% 
IMG OID644741356 
Productelongation factor Tu 
Protein accessionYP_001194287 
Protein GI146299696 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG AGAATTTTAA TCGTTCCAAA CCGCACTTAA ACATAGGTAC AATTGGACAC 
GTAGATCACG GAAAAACTAC ATTAACTGCT GCAATTACAA AAGTATTGTC AGATGCTGGT
TACTGTCAAG CAAAATCGTT TGATCAAATC GATAACGCTC CAGAGGAGAA AGAAAGAGGT
ATTACTATTA ATACATCACA CGTAGAGTAC GAAACAGCTA ACCGTCACTA CGCTCACGTT
GACTGTCCAG GTCACGCGGA TTACGTAAAG AACATGGTTA CTGGTGCTGC TCAAATGGAC
GGTGCTATCT TAGTAGTTGC TGCTACAGAT GGTCCAATGC CACAAACTCG TGAGCACATC
CTTTTAGGAC GTCAGGTTGG TATTCCAAGA ATCGTTGTTT TCATGAACAA AGTGGATATG
GTTGATGATG CTGAGTTATT AGAGCTTGTT GAAATGGAAA TTAGAGATTT ATTATCTTTC
TACGAATATG ATGGAGATAA TGGTCCTGTA GTTCAAGGTT CTGCTTTAGG AGGATTAAAC
AATGATCCAA ACTGGGTACC TAAAATTATC GAATTAATGG AAGCTGTTGA TAACTGGATC
GAAGAGCCAG TACGTGACGT TGCTAAACCA TTCTTGATGC CAGTTGAGGA CGTATTTACA
ATTACAGGTC GTGGAACTGT TGCTACAGGT CGTATCGAAA CTGGGGTTGC TAACACTGGA
GATCCTGTTG AGATCATCGG TATGGGAGCT GAAAAATTAA CTTCTACTAT TACAGGAGTT
GAGATGTTCC GTAAAATCCT TGATAGAGGT GAAGCTGGAG ATAACGTAGG TTTATTGTTA
AGAGGTATTG ATAAAGCTGA TATCAAAAGA GGTATGGTTA TTATTAAGCC AGGTTCAGTA
AAACCACACG CTAAATTCAA AGCTGAGGTT TATATCTTGA AAAAAGAAGA AGGTGGACGT
CACACTCCAT TCCACAATAA CTACCGTCCA CAGTTCTACG TACGTACAAC TGACGTAACA
GGAGTTATTT CTTTACCAGC AGGTGTAGAG ATGGTAATGC CAGGTGATAA CTTAACTATT
GAGGTTGCTT TATTAAGTCC AATCGCTATG AACGTAGGTT TACGTTTCGC TATCCGTGAA
GGTGGTAGAA CAGTTGGTGC TGGACAAGTT ACTGAAATCG TAGAGTAA
 
Protein sequence
MAKENFNRSK PHLNIGTIGH VDHGKTTLTA AITKVLSDAG YCQAKSFDQI DNAPEEKERG 
ITINTSHVEY ETANRHYAHV DCPGHADYVK NMVTGAAQMD GAILVVAATD GPMPQTREHI
LLGRQVGIPR IVVFMNKVDM VDDAELLELV EMEIRDLLSF YEYDGDNGPV VQGSALGGLN
NDPNWVPKII ELMEAVDNWI EEPVRDVAKP FLMPVEDVFT ITGRGTVATG RIETGVANTG
DPVEIIGMGA EKLTSTITGV EMFRKILDRG EAGDNVGLLL RGIDKADIKR GMVIIKPGSV
KPHAKFKAEV YILKKEEGGR HTPFHNNYRP QFYVRTTDVT GVISLPAGVE MVMPGDNLTI
EVALLSPIAM NVGLRFAIRE GGRTVGAGQV TEIVE