Gene Fjoh_1923 details

Gene Information

• Locus tag: Fjoh_1923
• Symbol: rnhB
• ID: 5091659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 2221993
• End bp: 2222658
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644741340
• Product: ribonuclease HII
• Protein accession: YP_001194274
• Protein GI: 146299683
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAAC TTAATTATTC AGGATTTACT TTAGAGACTG GAACTGATGA GGCTGGACGT 
GGATGTTTAG CGGGGCCGGT TACCGCAGCC GCGGTAATTT TACCCAGTGT TTTTGAGAAT 
AACATATTAA ACGACAGTAA GCAATTGTCT GAAAAAGCAA GAGCACTTTT AAAACCTATT 
ATAGAAGAGC AGGCGCTTTG TTTTTCGGTT ACGCATTTAT TTCCTGATGA AATTGACGAA 
ATAAACATCT TAAATGCTTC TATGAAAGGA ATGCAGGAGT GTATTTTGAA ATTAAAACAT 
ATACCTGAAT ATATTATTGT TGATGGAAAT CGTTCTCTAA ATGCAAAATT GGGATTGAAA 
AATACTTTTG GGAAGCAATT TTCTAAAGAA GAAATTGAAC TCTTAAAATC AATTCCTAAT 
CAAAGTATAA TTAAAGGTGA TGCTAAATTT CTAAGTATTG CCGCTGCTTC TATATTAGCA 
AAAACATACC GCGACGAATA TATGGACCAA ATTCATGAAG AATTCCCAAT GTACAATTGG 
AAACAAAACA AAGGATATCC AACCAAAGAA CATCGCGAAG CCATTAAAAA ATATGGCACT 
ACAAAATATC ACCGAATGAG TTTTAGACTT CTGCCGGATC AATTAGAGCT TGATTTTTTC 
GAATAA 

 

Protein sequence

MLQLNYSGFT LETGTDEAGR GCLAGPVTAA AVILPSVFEN NILNDSKQLS EKARALLKPI 
IEEQALCFSV THLFPDEIDE INILNASMKG MQECILKLKH IPEYIIVDGN RSLNAKLGLK 
NTFGKQFSKE EIELLKSIPN QSIIKGDAKF LSIAAASILA KTYRDEYMDQ IHEEFPMYNW 
KQNKGYPTKE HREAIKKYGT TKYHRMSFRL LPDQLELDFF E