Gene Fjoh_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1917 
Symbol 
ID5090444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2215912 
End bp2216913 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content33% 
IMG OID644741334 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001194268 
Protein GI146299677 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA TCGCCTTTTT CTCAACGCAG CCTTACGACA AAGCTTTCTT TAACAAATAC 
AATGCTGACT TTGGTTTTGA ATTAGATTTT TTCGAAACAC AATTGAATCC GCAGACTGTA
ATTTTAATTG AAAATGCTGA AATTGTCTGT GTTTTCGTAA ATGATATTGT AAACGAAACA
GTAATAAAAC AATTGGCAGA AAAAAATGTA AAAATTATTG CATTGCGATG TGCGGGTTTT
AATAATGTTG ATCTGGATGC TGCAAAAAAG TACTGCCTTA AAGTCTGCCG TGTTCCTGCA
TATTCTCCAC AAGCCGTTGC AGAACATGCA ATGGCCATGA TTTTGACTTT AAACAGAAAA
ACACATAAAG CTTATAACAG AGTTCGCGAA CAGAATTTTT CTCTAAACGG ATTATTGGGG
TTTGATTTGT TTGGAAAGAC AATTGGAATT ATTGGAACAG GAAATATAGG AAAAGCATTT
TCTAAAATTG CTCTTGGTTT TGGCTGTAAA GTTTTGGCTT ATGATATTGT TGAAAATGAA
GAAATGAAAA AGGAAGGCGT ATCTTTTGTT GGTTTAGAGG AGATTTTTAA ATCAAGTGAT
ATTATTTCGC TTCACTGCCC ATTAAACGAT CAGACGAAGC ATGTGATTAA TAAGACTTCG
ATTTCTTTTA TGAAAGATAA TGTAATGATT ATCAATACAA GCCGCGGCGG ATTAATAGAA
ACTTCGAGTG TAATTGAAGG TTTAAAAGAA GGTAAAATAG GTTATTTAGG GATTGATGTT
TACGAACAGG AAGAAAAACT GTTCTTTAGA GATTTATCAG CAGATATTAT TCAGGATGAT
GCAATTCAGC GTTTAATGAG TTTTCCAAAT GTTTTGGTAA CGGCGCATCA GGCATTTTTT
ACTAATGAAG CTTTAACCCA GATCGCTTTG GTGACTTTTA ATAATATAAA ATCATTGCTG
GAGAAAAACG ATATTGAAAA TAAAACAGCT CTGCTGGTTT AA
 
Protein sequence
MSKIAFFSTQ PYDKAFFNKY NADFGFELDF FETQLNPQTV ILIENAEIVC VFVNDIVNET 
VIKQLAEKNV KIIALRCAGF NNVDLDAAKK YCLKVCRVPA YSPQAVAEHA MAMILTLNRK
THKAYNRVRE QNFSLNGLLG FDLFGKTIGI IGTGNIGKAF SKIALGFGCK VLAYDIVENE
EMKKEGVSFV GLEEIFKSSD IISLHCPLND QTKHVINKTS ISFMKDNVMI INTSRGGLIE
TSSVIEGLKE GKIGYLGIDV YEQEEKLFFR DLSADIIQDD AIQRLMSFPN VLVTAHQAFF
TNEALTQIAL VTFNNIKSLL EKNDIENKTA LLV