| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1894 |
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| Symbol | alaS |
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| ID | 5090421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2182497 |
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| End bp | 2185136 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741311 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001194245 |
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| Protein GI | 146299654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAC AAGACGTACG TAAACAATTT TTAGATTTTT TTGAGAGTAA AGGTCATACT
ATTGTTCCTT CAGCTCCTAT TGTACTTAAA GACGACCCAA CCTTAATGTT CAATAACTCG
GGAATGGCCC AGTTTAAAGA ATTTTTCTTA GGAAACGGAA CTCCAAAAAG TCCTAGAATA
GCCGATACGC AAAAATGTCT TCGTGTTTCA GGAAAACATA ACGATCTTGA AGAAGTAGGT
ATTGATACGT ACCACCACAC TATGTTTGAG ATGTTAGGAA ACTGGTCTTT TGGTGATTAC
TTCAAAAAAG AAGCAATTAA CTGGGCTTGG GAACTATTGA CAGAAGTATA TAAAATTCCA
AAAGAGAATC TTTATGTTTC TGTTTTTGAA GGAAGTAAAG AAGATAACGT TCCGTTTGAC
CAGGAAGCTT GGGATATCTG GAAAACATTA ATCGACGAGG ACAGAATTAT TCTTGGAAAT
AAAAAAGATA ATTTCTGGGA AATGGGAGAC CAAGGACCAT GCGGACCTTG TTCTGAAATT
CACGTTGATT TACGTTCTGC AGAAGAAAAA GCTTTAGTTT CTGGAAAAAG TCTGGTAAAC
AATGATCACC CGCAAGTTGT TGAAATCTGG AATAACGTAT TCATGGAATT CAACCGTAAA
GCAGATGGTT CGTTAGAAAA ACTTCCTGCA CAGCACGTAG ATACCGGAAT GGGATTTGAG
CGTTTGTGTA TGGCATTGCA AGGAAAAACA TCAAACTATG ATACTGATGT TTTCATGCCT
TTAATTAGAG AAATCGAAAC GATTACAGGT GCAAAATATA CAACTAATGA TGTAACAGGC
ATTAGTGAAG AACAAAATAA AATGAATATT GCTATTCGTG TAGTGGCAGA TCACGTTCGT
GCGGTAGCAT TTGCTATTGC AGATGGTCAG TTGCCATCTA ACACAGGAGC TGGTTATGTA
ATTCGCAGAA TTTTACGTCG TGCTATTCGT TACGGATTTA CTTTCTTAGG GACAAAAGAG
CCGTTTATCT ATAAATTGGT TGAAACTTTA AGCGAGCAGA TGGGAGATTC TTTCCCGGAA
ATCAGAACGC AGAAAGCACT TTGTTCGAAT GTAATTCGTG AAGAAGAAAA TTCATTCCTG
AAAACATTAG ATCAGGGATT AATTCTTTTA GATGCTGTAA TTTTAAATAA TACAGGAGAT
ACAATTGATG GTAAAAAAGC TTTCGAATTG TACGATACAT ACGGTTTCCC GATTGATTTA
ACCGCTTTGA TTCTTTCTGA AAGAGGATTG AAATTGGACG AAGAAGGATT CCAGGAACAA
TTGCAATTAC AAAAAGAAAG ATCTCGTGCA GCATCAAAAG TGACTGCTGG AGACTGGAAT
GTAATTGTAG AAGATGATAT TCAGGAATTT GTTGGATATG ACAGATTATC ACAACAAGTA
AAAATCACAA AATACCGCAG AGTTGAAAGT GTTAAAGATG GTGAGATTTT CCAATTGGTT
TTCAATGCAA CGCCATTTTA TGGAGAAAGC GGAGGACAAA CAGGAGATAA AGGATATCTG
GAAGCTCAAA ACGGTGATAT CGTCTATATT ATCGATACTA AAAAAGAGAA TAACCAAACG
ATACATTTAA CACAATCGTT ACCGGAAAAT ATTACTGGGA CTTTTAATGC AGTTGTTGAT
GCAAACCAGA GAGCTAAAAC TTCGTCAAAT CACTCGGCTA CACACTTATT GCACCAAGGT
TTACGTAAGA TTTTAGGAAC GCACATTGAG CAGAAAGGAT CGATGGTAAG AAATGCTTCA
TTGCGTTTTG ACTTTTCTCA CTTCTCTAAA GTGACTGATG AAGAGTTGTT AGAAGTAGAA
AACTTTGTAA ATGCAAGGAT TCGTGAGAGT TTGCCATTAA TCGAAAAAAG AGCTATTCCA
AAAGAACAAG CTCTTGAAGA TGGAGCAATT GCTTTGTTTG GAGAGAAATA CGGTGATCTA
GTTCGTACTA TTAAATTTGG AGATTCTGTC GAATTATGCG GAGGAACTCA CGTTGCCAAT
ACATCTGATA TCTGGCATTT TAAAATTGTT TCAGAAGGAG CTGTTGCAGC TGGAATTAGA
AGGATAGAGG CAATTACTAG TGAAGCAGCA AAAGAATATT TTGAGTCTCA GGCTGTTTCT
TTAGCAGAAA TTAAAGAAGC ACTTAAAAAT GCTCAGGATC CGGTAAAATC GATCTTGGCA
TTACAAGACG AAAATGCACA GTTGAAAAAA CAATTAGAAG CTTTATTAAA AGATAAAGCT
AAAAATATGA AAGCTGATTT AGCTAAAGAA TTACAAGAAA TCAATGGCGT TCAGTTTTTA
GCAAAACAAG TTGATTTAAA CCCAGAAGGA GCAAAAGATT TAGCTTACGA ATTAGGTGGT
TCTTATAACA ACTTATTTGT AGTTTTCGCA ACGGCTCATG AAGGAAAACC AATGTTAACT
TGTTACATCT CTAAAGAAAT TGTAGCATCC AAAAATCTAA ACGCAGGACA AGTTGTTCGC
GAATTAGGTA AATACATCCA AGGCGGCGGC GGCGGACAGC CTTTCTTCGC TACAGCTGGA
GGTAAAAATG TTGATGGAAT TGGGGAAGCT TTAGCTAAAG CGGTGGATTT TGTTAAATAG
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| Protein sequence | MKSQDVRKQF LDFFESKGHT IVPSAPIVLK DDPTLMFNNS GMAQFKEFFL GNGTPKSPRI
ADTQKCLRVS GKHNDLEEVG IDTYHHTMFE MLGNWSFGDY FKKEAINWAW ELLTEVYKIP
KENLYVSVFE GSKEDNVPFD QEAWDIWKTL IDEDRIILGN KKDNFWEMGD QGPCGPCSEI
HVDLRSAEEK ALVSGKSLVN NDHPQVVEIW NNVFMEFNRK ADGSLEKLPA QHVDTGMGFE
RLCMALQGKT SNYDTDVFMP LIREIETITG AKYTTNDVTG ISEEQNKMNI AIRVVADHVR
AVAFAIADGQ LPSNTGAGYV IRRILRRAIR YGFTFLGTKE PFIYKLVETL SEQMGDSFPE
IRTQKALCSN VIREEENSFL KTLDQGLILL DAVILNNTGD TIDGKKAFEL YDTYGFPIDL
TALILSERGL KLDEEGFQEQ LQLQKERSRA ASKVTAGDWN VIVEDDIQEF VGYDRLSQQV
KITKYRRVES VKDGEIFQLV FNATPFYGES GGQTGDKGYL EAQNGDIVYI IDTKKENNQT
IHLTQSLPEN ITGTFNAVVD ANQRAKTSSN HSATHLLHQG LRKILGTHIE QKGSMVRNAS
LRFDFSHFSK VTDEELLEVE NFVNARIRES LPLIEKRAIP KEQALEDGAI ALFGEKYGDL
VRTIKFGDSV ELCGGTHVAN TSDIWHFKIV SEGAVAAGIR RIEAITSEAA KEYFESQAVS
LAEIKEALKN AQDPVKSILA LQDENAQLKK QLEALLKDKA KNMKADLAKE LQEINGVQFL
AKQVDLNPEG AKDLAYELGG SYNNLFVVFA TAHEGKPMLT CYISKEIVAS KNLNAGQVVR
ELGKYIQGGG GGQPFFATAG GKNVDGIGEA LAKAVDFVK
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