| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1893 |
|---|
| Symbol | |
|---|
| ID | 5090420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 2181237 |
|---|
| End bp | 2182214 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644741310 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001194244 |
|---|
| Protein GI | 146299653 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG TAAAATATTA TTACGACTCA GAAAATCTGG CTTATACGAA AATAAAAACC
AGAAAAAGAA TAAAAATTGG TTACGCATTA CTGTTTTTAG TAGCTTCGGC ATTGTTTGGC
TTTTTAGTTT TTGTACTTTT AATTAACACA CCTTACTTTG AAACTCCAAA AGATCGGCTT
CAGGCACGTG AAATTGAAAA TTTAAAACTT CAATATTCGA TTTTGAATAA AAAACTGGAC
GAAATCGACG CTGCAGCAGA TGCCCTGGAA GAACGAGATA ATAATATTTA CCGGGTTTAT
TTTAATAAAG CAGAAATTCC CGATTCTATT AGAAAAGCGG GTTTTAGAAA TCCTGAAAAA
TATAAAGCAT TAGAAGGTTA CAACAACTCT CAGCTGGTTT TAAATACCAC AAAAAGAGTA
GATAAACTTT CAAAAGAATT AGCAATTCAA TCTAAATCAT TAGATGAAAT ATTGAAATTA
GCCGGAGCAA AAGAAAGTTT ATTATTGGCG ATTCCGGCAA TTCAGCCTGT TCAGAATGAA
AATTTAAAAC GTGTTGCTTC TGGTTTTGGA TACAGAATTG ATCCTTTTAC AAAAGTGAGA
AAAATGCACA ACGGAATGGA TTTTACTGCC AACACCGGAG CTCCGGTTTA TGCCACTGGT
GACGGCGTTG TGGCAAGAGC AGATGACACT GCTTCGGGCT TTGGAAACCA TGTTGTGATC
AGGCACGGTT TTGGATATGA AAGTTTGTAT GCGCATTTAA GCAAATACAA CTGCAGACCC
GGACAAAAAG TCAAAAGAGG CGACGTTATA GGTTATGTAG GAAGTACAGG AAGATCTGAA
GGGCCACATT GTCATTACGA AGTACATAAA GATGGAAAAG TCGTAAACCC GCTGAACTTC
TATTACGGCA ATATTTCGGC AGCAGAATAC GTCGCAATTT CGCAAATGGC AAATCAGGAA
AATCAGTCAT TAGATTAA
|
|---|
| Protein sequence | MAKVKYYYDS ENLAYTKIKT RKRIKIGYAL LFLVASALFG FLVFVLLINT PYFETPKDRL
QAREIENLKL QYSILNKKLD EIDAAADALE ERDNNIYRVY FNKAEIPDSI RKAGFRNPEK
YKALEGYNNS QLVLNTTKRV DKLSKELAIQ SKSLDEILKL AGAKESLLLA IPAIQPVQNE
NLKRVASGFG YRIDPFTKVR KMHNGMDFTA NTGAPVYATG DGVVARADDT ASGFGNHVVI
RHGFGYESLY AHLSKYNCRP GQKVKRGDVI GYVGSTGRSE GPHCHYEVHK DGKVVNPLNF
YYGNISAAEY VAISQMANQE NQSLD
|
|---|
| |