Gene Fjoh_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1880 
Symbol 
ID5090407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2166234 
End bp2168996 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content33% 
IMG OID644741297 
Producthypothetical protein 
Protein accessionYP_001194231 
Protein GI146299640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGA TTTATTCATT TTTATCGTTT TTATTCCTTT TTGTTTTGAC TGCCAATGCA 
CAAAACGACG TTACACTTAG AGGAACCGTT TTAGACGTTA ACACACAATT GCCTCTGGAA
ATGGCAACTG TTTATTTTAC TACTATAAAA GATTCTACCG TTATCGAATA CGCCACTACA
GATAAAAATG GTGCTTTTAG AATGGATATC AAAAAATATG AAAAGCCTGT TTTTTTAAAG
GTGAGTTATA TGGGATATCA AACCTATTAC GAAGAATACA AGGGGCTTAC TGAAAACAAA
GATTTCGGAA AACTTTACAT GATAGAAAAT GTAAATACGC TGAATGACGT TGTTATAAAA
ACCGAAGCAG CGCCAATTAC TATCAAAAAA GATACGTTAG AGTTTAACGC GGCTTCTTAT
AAAGTCCGTC CGGATTCTAA TGTTGAAACT TTATTAAAAC AACTGCCGGG ATTTGATGTC
GATAATGACG GAAAAATTAC GGTGAACGGA CGAGAAGTGA ATCAGGTTTT GGTAAACGGA
AAAACGTTTT TTGATAAAGA CGGAGCGATT GCCATTAAAA ATCTGCCGGC CGATATTATT
AAAAAAATTC AGGTTTCTGA TTTTAAAACC AAAAAAGAAG AGCTTTCTAA ACAAGAATCA
ACTTCAGATT TTTCGAGTAT TAATATTACT ATTGATGAAA AGAAAAACAA AGGATATTTT
GGAAAAATAA TGGGCGGTTA TGGTACCGAT GATCGTTATG AAGCCAATGT GAATCTGAAT
TATTTTAATA ACAAGCAGAA AATAAGTTTA CTGGCTTCGT CAAACAATAT CAATTCGACC
GGATTTTCAA TGGACGATGT TTTTGATAAT ATGGGAGGCG GAAGAAATAG CAGCGGAAGA
GGAGGAAGTA CAAGCTCTGG TTCTAGTGGA AAAGGAATTA CGCAGTCAAA TTTAGTGGGA
GTTAATTACT CTGATGACTG GACTGAAAAA CTGCTGGCTA TGGGAAGTTA CAATTTCTCA
AATACCATTA ATAACAACGA CAGTAAATCA AACCAGCTTA GTTTTTTACC AACCGGAAAT
ATTATAACCG AGGCCGAAGC TAAAACAAGA AATGAAAGTA CAGGAAATAA CGTCAATTTT
GAATTAGAGT ATAAAATCAG TCCAAGTATT CGATTGGTTG TAGCACCAAA ATTGAATCAA
TCGAGAACCA ACAGTAATTC GACTTCGTCT AGCTTTTCTG AAGATGAAGA TGGAAACGAG
TTGAACAGAA GTACTTCAAA ATCATATTCT GAAGGTGATA ATACCAATTT TGGAAACACA
ATCAATTTTA ATAAATCTTT CGAAAAGAAA TCTCGAAATT TTAGTTTTGT TTTTACCAAT
AACAACACTA ACAATACGGC AGATGGTTTA AATCTTTCGG AAACGATTTT CTATCAGGAC
AATCAGCCGA ATGATGAAAG AAATCAAACT ACAAAAAAGA AAAACACCAG CGATTCTTAT
TCGGCAGATA TTGAATATAC TGAGCCAATA ACAGATTCGC TTCGAGTACG ATTTGGATCT
AATTTTGATT GGAAAAGTAC TTCAAACGAC GAAAGAACTT TTAATTTTGA TCCAGATACA
CAAGAATATA CCGATCTTAA TTTAGCATTG AGTAATTATA CAAGTTCAAT TCAAAACTCG
GTTACGCCAA AAGTTGGAGT TACGCTTCAA AAAAATAAAT TTACGCTTAA CCTTGACAGC
CGAACATCGA TTGTAAATTT TGATAATCAC TCACTGTATT TGAATAATGC GACAGATTTA
AGTAAAAAAT ATGCTTTACC ATTTGCAACA GCGGTACTGC GATATAAATT TGACCGTTCT
AAAAATCTAT CATTCAAATA CGATTATTCT AATACTCTGC CATCGGCTGC ACAATTAATG
CCGGTTGTAA ATCTTAATAA TCCATTGAAT ACCATTATCG GAAATCCTGA TCTGCATCCT
GTAGAAAAAA ACAGTATTAA TTTTAATTAC AGAAATTACG ATTTTCGTTC TCGTTCTGGG
TATAGCTTGT ACATAAAAGG AGATTATTAT GATAATGATA TTGTTTCGAC TTCAATTTAT
GATGAAAGCG GAAAAAGAAC GACAACGTAT GTAAATATTT CGGGTGTTTA TAATGCTTCG
ATTGGAGCAA ACTGGAACCA GTCTATAAAA TCTGGCGCGC ATACACTGCG TTACGGATTA
GGATTAAATG CTGGTTATAC TTTTGATAAA GGTTTTACAA ATGCTGTTTT GTATAATGCA
AAATCGACTT CTATTACGCC AAAAGTATAT TTATCATACG ATTATGGAGA TGTTCTGACG
ATTGCACCAT CTTATAATTT ATCCTACAAC CAGTCGAAAT ACGAGAATTA TTCGAGAGAT
GCTACTTCAA ATGTTGTACA CAGAATCAAT TTACAAACTA CAACTTACTG GCCAGAAAAT
TTAATCTTCG GAAATGATTT TGGTTATACT TATAATTCAA ATATTTCAGG CGACTTTAAA
AAAGATTTTT ATTTATGGAA TACGAGTTTG TCGTATGGAT TTTTAAATAA AACACTTTAT
GCTAAAGTAA AAGTATATGA TGTTTTAAAT CAAAATTTAA GTGCAACAAG AACCATTTCG
GCAACTTCAA TCCGCGATGA AGAAAATACG GTTTTAAGAC GTTATGTAAT GTTTTCTCTG
GCTTATAAAA TAGGAAACTT TACAGGGTCT GAAAAAGGAG GAAAGAGAAG ACCGAGAGAT
TAA
 
Protein sequence
MTKIYSFLSF LFLFVLTANA QNDVTLRGTV LDVNTQLPLE MATVYFTTIK DSTVIEYATT 
DKNGAFRMDI KKYEKPVFLK VSYMGYQTYY EEYKGLTENK DFGKLYMIEN VNTLNDVVIK
TEAAPITIKK DTLEFNAASY KVRPDSNVET LLKQLPGFDV DNDGKITVNG REVNQVLVNG
KTFFDKDGAI AIKNLPADII KKIQVSDFKT KKEELSKQES TSDFSSINIT IDEKKNKGYF
GKIMGGYGTD DRYEANVNLN YFNNKQKISL LASSNNINST GFSMDDVFDN MGGGRNSSGR
GGSTSSGSSG KGITQSNLVG VNYSDDWTEK LLAMGSYNFS NTINNNDSKS NQLSFLPTGN
IITEAEAKTR NESTGNNVNF ELEYKISPSI RLVVAPKLNQ SRTNSNSTSS SFSEDEDGNE
LNRSTSKSYS EGDNTNFGNT INFNKSFEKK SRNFSFVFTN NNTNNTADGL NLSETIFYQD
NQPNDERNQT TKKKNTSDSY SADIEYTEPI TDSLRVRFGS NFDWKSTSND ERTFNFDPDT
QEYTDLNLAL SNYTSSIQNS VTPKVGVTLQ KNKFTLNLDS RTSIVNFDNH SLYLNNATDL
SKKYALPFAT AVLRYKFDRS KNLSFKYDYS NTLPSAAQLM PVVNLNNPLN TIIGNPDLHP
VEKNSINFNY RNYDFRSRSG YSLYIKGDYY DNDIVSTSIY DESGKRTTTY VNISGVYNAS
IGANWNQSIK SGAHTLRYGL GLNAGYTFDK GFTNAVLYNA KSTSITPKVY LSYDYGDVLT
IAPSYNLSYN QSKYENYSRD ATSNVVHRIN LQTTTYWPEN LIFGNDFGYT YNSNISGDFK
KDFYLWNTSL SYGFLNKTLY AKVKVYDVLN QNLSATRTIS ATSIRDEENT VLRRYVMFSL
AYKIGNFTGS EKGGKRRPRD