Gene Fjoh_1865 details

Gene Information

• Locus tag: Fjoh_1865
• ID: 5090392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 2149502
• End bp: 2150215
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 644741279
• Product: leucine-rich repeat-containing protein
• Protein accession: YP_001194216
• Protein GI: 146299625

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.956378
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCT TTGCAACACT TTTTTTAGCA TTTGTTTTTT CTCTTAATAC TTTTGCAGAT 
ACTGTTTCAG ATAAAGAGAA AGAGGTGCTG ATAAAATTAT ATCATGCGAC TAATGGTTTG 
CAGTGGAAAA TTAAATGGGA TTTATCGTTG TCAGTTTCAA CATGGTATGG AGTTCATACT 
GAAAACGGAA AAGTAACAGC TCTAAATTTA TCCAATAATA ATCTGCAGGG AAAACTGCCT 
GTAGAGTTTT TTGATCTGGT AAATTTAGTA ACTGTAGATT TGCATAAAAA CAATTTAAAA 
GGAGAATTAT CAGCCGAAAT AGGGAAGTTG AATCAATTAC AAATTCTGTG TTTGTCTGAT 
AATGAAATCG AAGGAATACT GCCTGATTCG CTTTATAAAA TTTCGACTTT AAAAGTACTT 
CTTTTAAATA GTAATAAATT TTCGGGTAAT TTAAGTTCTG ATATTATGAA TTTAAGTTTT 
TTACAAAACC TGAGTTTATT CAACAATAAT TTTGAAGGAG AGATTCCAAA AGAATTAGAA 
AAGTTATCTA ACTTGTCTGA ATTGAATCTT TCTTACAATA AATTCAAAGG TTCGGTCTCA 
AGAAGTTTAA CTGTGCTGGA TTCTTTGAAT ATGACAATGT TTGACGAGAA TGGAAATCCA 
TTTTTGCTGG ACATAAACGA AGAAAGAAAA AATGAAAATA TTACCATAAA TTAA 

 

Protein sequence

MKSFATLFLA FVFSLNTFAD TVSDKEKEVL IKLYHATNGL QWKIKWDLSL SVSTWYGVHT 
ENGKVTALNL SNNNLQGKLP VEFFDLVNLV TVDLHKNNLK GELSAEIGKL NQLQILCLSD 
NEIEGILPDS LYKISTLKVL LLNSNKFSGN LSSDIMNLSF LQNLSLFNNN FEGEIPKELE 
KLSNLSELNL SYNKFKGSVS RSLTVLDSLN MTMFDENGNP FLLDINEERK NENITIN