| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1851 |
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| Symbol | |
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| ID | 5091476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 2132134 |
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| End bp | 2134653 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644741265 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001194202 |
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| Protein GI | 146299611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA ATTTAGTAAT AGTGGAGTCA CCTGCAAAGG CGAAAACGAT CGAGAAATTT
CTTGGGAGTG ATTTTCAGGT GGAGTCAAGT TATGGTCACA TAGCAGACTT ACCATCCAAG
GAAATAGGGG TAGATGTAGA GAATGGTTTT AAACCTAAAT ATGAAGTTTC CCCGGATAAA
AAAGCCTTGG TAACGAAACT AAAATCGCTA TCTAAAAATG CCGAAACGGT TTGGTTAGCA
TCCGATGAGG ACCGCGAGGG AGAGGCTATT TCATGGCACT TGGCGGAAGA ATTAAAACTG
GATACAAAAA AGACCAAACG AATTGTTTTT CACGAGATTA CAAAATCTGC GATTCTTAAA
GCAATTGACA ATCCAAGAGA AATTGATTAT AATTTAGTTA ATGCGCAGCA AGCGAGAAGA
GTATTAGATC GTTTAGTGGG TTATGAATTA TCTCCGGTTT TATGGAGAAA AATTAAAGGC
GGACTTTCTG CAGGTCGTGT ACAATCTGTT TCTGTACGTT TGATTGTTGA AAGAGAACGC
GAAATTCAAA GTTTTAATGC AGTGGCAACC TATTCAATTG TTGCTGAATT TGTAAACGAA
GCTGGAAAAG CTTTTAAAGC AAAACTGCCA AAAAACTTCA ATACAAAAAA AGAAGCCGAA
GATTTTTTAA ACAAAAACAT CGGTTCTAAA TATAAGGTAG CTGATTTAGA AACTAAACCT
ACCAAAAAAT CTCCAACAGC ACCTTTTACA ACTTCAACGT TGCAGCAGGA AGCAGCAAGA
AAATTATACC TGCCGGTTGG AATTACCATG CAGTTAGCAC AGCGTTTATA TGAGGCGGGA
CTTATTACTT ATATGAGAAC CGACTCGGTA AATCTTTCTA AAGAAGCAAT GGATGCTGCA
CAAGCAGAAA TCATAAAATC TTACGGGGAA GAATTTTCTA AACCGAGAAT TTTTGCAACA
AAAAGTAAAG GAGCACAAGA AGCGCACGAA GCAATTCGTC CGACTGATAT GTCACGCCAT
ACTGTAAATA TCGATCGTGA TCAGGCTCGT TTGTATGATT TGATCTGGAA AAGAACTTTA
GCATCTCAAA TGAGCGATGC GCAGCTTGAA AGAACAAACG TAAAAATAGA AGCTGATAAT
CATGATGAGC TTTTTACAGC TTCTGGAGAA GTTTTGCTTT TTGAAGGTTT CTTAAAAGTG
TATTTAGAAG GTCATGATGA TGATGAGGAA GAGCAAGAAG GAATGCTTCC GGCTTTAAAA
GTAAACGAAA AGCTGGCTAA TAACTATATT ACAGCTACAG AACGATATTC AAGACCGCCT
GCACGTTATA CAGAGGCATC TTTGGTTAAA AAACTAGAGG AACTTGGTAT CGGACGTCCG
TCTACTTATG CACCAACTAT TTCAACAATT ATCAATAGAA ATTATGTTGA AAAAGGAACG
CTTGAAGGGC AGGAACGTAA CTATACACAG TTGACTTTAC AAAATAGTAA AGTAGGTGAG
AAGCTTTTAA AAGAAAATAC TGGTTCTGAT AAAGGAAAGC TGGTTCCTAC TGATATTGGT
ACTATCGTAA CAGATTTCTT AGTTAAGAAT TTCGGGAATA TTTTAGATTA TAATTTTACT
GCAAAAGTTG AGCAGGATTT TGATGAAATT GCCGAAGGAA ATATCGACTG GGCAATCATG
ATGCAGGATT TCTACAATAA ATTTCACCCA AATGTAAAAG AAGTTGAAGC TAATGCTGAA
CGTGAAAGCG GTGAAAGAAT TTTAGGAAAA GATGCAGATG GAAGACAAGT TTCTGTTCGT
TTAGGGAAAT TTGGACCAAT GGCTCAAATT GGAGAAGCAG ATGATGAAGA TAAAAAGTTT
GCCAGCCTGA TGGCAGATCA AAATATTGGA AATATCACAC TTGAAGAAGC TTTGAATTTA
TTCTTGCTTC CTAAAAATTT AGGAGAATAT AAAGGAGAAG AAGTAGAAGT GAGCAATGGT
CGTTACGGTC CGTATGTTCG TCACGGAAGT GTGTTTATTT CATTACCTCG CGGTGAAGAT
CCTTTGAATG TTACAAAAGA AAGAGCTAAG GAATTAATTG ACGAAAAAGC ACTTGCTGAT
GCGCCAATTG CTGTTTACAA AGGAGAAGCA GTTCAAAAAG GTGTGGGACG TTTTGGTCCT
TTTATTAAAT GGAACGGTCT TTTTGTAAAT GTGAGCAAAA AATACAATTT CGATAATTTA
TCTCAGGCAG ATGTTGAAGA ATTAATTGAA GATAAATTAC AAAAGAATAT TGATAAAGTT
CTTCACAATT GGGAAGAAGA AGGAATTGTA GTTGAAAAAG CCCGCTGGGG ACGTTCAGTT
ATTTTAAAAG GTAAAATCAA AATTGAATTA AGTAAAGATG TTGATGCGAC AAAATTAACA
TTGGCCGAAG TTCAGGAAAT GATCGAGAAA AAAGCACCGG CTAAAAAAAC AGCAGCAAAG
AAAACCACAG CAGCTAAAAA AACTACAACC GCTAAAAAAG CACCAGCAAA AAAGAAATAA
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| Protein sequence | MAKNLVIVES PAKAKTIEKF LGSDFQVESS YGHIADLPSK EIGVDVENGF KPKYEVSPDK
KALVTKLKSL SKNAETVWLA SDEDREGEAI SWHLAEELKL DTKKTKRIVF HEITKSAILK
AIDNPREIDY NLVNAQQARR VLDRLVGYEL SPVLWRKIKG GLSAGRVQSV SVRLIVERER
EIQSFNAVAT YSIVAEFVNE AGKAFKAKLP KNFNTKKEAE DFLNKNIGSK YKVADLETKP
TKKSPTAPFT TSTLQQEAAR KLYLPVGITM QLAQRLYEAG LITYMRTDSV NLSKEAMDAA
QAEIIKSYGE EFSKPRIFAT KSKGAQEAHE AIRPTDMSRH TVNIDRDQAR LYDLIWKRTL
ASQMSDAQLE RTNVKIEADN HDELFTASGE VLLFEGFLKV YLEGHDDDEE EQEGMLPALK
VNEKLANNYI TATERYSRPP ARYTEASLVK KLEELGIGRP STYAPTISTI INRNYVEKGT
LEGQERNYTQ LTLQNSKVGE KLLKENTGSD KGKLVPTDIG TIVTDFLVKN FGNILDYNFT
AKVEQDFDEI AEGNIDWAIM MQDFYNKFHP NVKEVEANAE RESGERILGK DADGRQVSVR
LGKFGPMAQI GEADDEDKKF ASLMADQNIG NITLEEALNL FLLPKNLGEY KGEEVEVSNG
RYGPYVRHGS VFISLPRGED PLNVTKERAK ELIDEKALAD APIAVYKGEA VQKGVGRFGP
FIKWNGLFVN VSKKYNFDNL SQADVEELIE DKLQKNIDKV LHNWEEEGIV VEKARWGRSV
ILKGKIKIEL SKDVDATKLT LAEVQEMIEK KAPAKKTAAK KTTAAKKTTT AKKAPAKKK
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