Gene Fjoh_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1850 
Symbol 
ID5091475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2130351 
End bp2131796 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content37% 
IMG OID644741264 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_001194201 
Protein GI146299610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TTATTGAAGA AAGCAAACAA GGTGAAAGTC TTGTTTTAGA AAATAAACCT 
GAGAATACTA AAAAACTATT TATAGAGAGT TACGGCTGTG CGATGAATTT TTCGGACAGT
GAAGTCGTAG CTTCCATTTT GTCTGACGGA GGATATAACA CTACTTCTGT TTTGGAAGAA
GCAGATTTGG TTTTGGTAAA CACTTGCTCA ATTAGAGACA AAGCTGAACA GACTATTCGT
AAACGTCTTG AAAAATACAA TGCTGTAAAA CGCACAAATC CGAAAATGAA AGTGGGTGTT
TTGGGCTGTA TGGCCGAGCG TTTAAAAAGC CAGTTCTTGG AAGAAGAAAA AATAGTTGAT
CTTGTTGTTG GTCCTGATGC TTATAAAGAT CTTCCAAATT TATTGGCCGA AGTTGAAGAA
GGACGCGACG CCATCAATGT AATTTTATCA AAAGAAGAAA CTTACGGAGA TATTTCGCCG
GTTCGTTTAA TGAGTAACGG AATCACCGCT TTGGTTTCTA TCACCCGTGG ATGCGATAAT
ATGTGCACGT TTTGTGTTGT ACCTTTTACA CGCGGACGCG AACGCAGCCG TGAGCCTCAA
AGTATCATGG CTGAAATTCA GGATTTATGG AGCAAAGGTT TTAAGGAAAT TACACTTCTT
GGGCAAAACG TTGACAGTTA CCTTTGGTAC GGCGGCGGTT TGAAAAAAGA TTTTGTAAAT
GCTTCTGAAA TGCAAAAAGC AACTGCTGTC GATTTTGACC AATTATTAGA AATGGTTGCT
GTTGGTTTCC CTAAAATGCG TATTCGTTTT TCGACATCAA ATCCGCAGGA TATGCACGAA
AGTATTTTGC ACGTTATGGC AAAATATCCA AATATCTGTA AACACATTCA CTTGCCAGTT
CAATCTGGAA GTAACAGAAT TTTAAAAGAA ATGAATCGTC TGCATTCTCG TGAAGAATAT
ATGGCTTTGA TTGATAAAAT TAGAGCTATT GTTCCAGATG CTTCGATTTC GCAGGATATG
ATTGCCGGTT TCCCAACAGA AACTGAACAA GATCACCAAG ATACAATGAG TTTGATGGAA
TATGTAAAAT ATAATTTCGG TTATATGTAT TCGTATTCTG AACGTCCTGG AACTTTGGCA
GGAAGGAAAA TGAAAGATGA TGTCGAGGAA GAAACTAAAG CAAGAAGATT ACAAGAAATC
GTCGATTTAC AGCAAAAACA TGCTTGGTTT AGAAGCGAAG AATTTGTTGG AAAAACAGTT
GAAGTTTTAG TAGAAAAAGT TTCTAAAAAA TCTAAAGATG AATTCTCCGG AAGAAATTCT
CAAAGTATTA CGGTAGTTTT CCCTAAAGAG AATTATAAAA TTGGAGATTT CGTAAATGTA
AAAATCACAA GCTGTACTTC TGGAACTTTA AAAGGTGAAG CGGTTGGGCT TAGCAGCATG
AATTAA
 
Protein sequence
MEKIIEESKQ GESLVLENKP ENTKKLFIES YGCAMNFSDS EVVASILSDG GYNTTSVLEE 
ADLVLVNTCS IRDKAEQTIR KRLEKYNAVK RTNPKMKVGV LGCMAERLKS QFLEEEKIVD
LVVGPDAYKD LPNLLAEVEE GRDAINVILS KEETYGDISP VRLMSNGITA LVSITRGCDN
MCTFCVVPFT RGRERSREPQ SIMAEIQDLW SKGFKEITLL GQNVDSYLWY GGGLKKDFVN
ASEMQKATAV DFDQLLEMVA VGFPKMRIRF STSNPQDMHE SILHVMAKYP NICKHIHLPV
QSGSNRILKE MNRLHSREEY MALIDKIRAI VPDASISQDM IAGFPTETEQ DHQDTMSLME
YVKYNFGYMY SYSERPGTLA GRKMKDDVEE ETKARRLQEI VDLQQKHAWF RSEEFVGKTV
EVLVEKVSKK SKDEFSGRNS QSITVVFPKE NYKIGDFVNV KITSCTSGTL KGEAVGLSSM
N