| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1848 |
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| Symbol | |
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| ID | 5091473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 2128584 |
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| End bp | 2129843 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644741262 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001194199 |
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| Protein GI | 146299608 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACAG TTCAAGCAAT AAAACAACGA TTTGAGATTA TTGGTAATGA CCCGAAATTA
AATCGTGCCA TTGAAAAAGC CATTCAGGTT GCTCCAACTG ATATTTCGGT TATGGTAACT
GGGGAAAGTG GTGTTGGTAA AGAAAACATT CCTAGAATTA TACATTCGCT TTCGCACAGA
AAGCATGGTA AATATATTGC CGTAAACTGC GGTGCAATTC CCGAGGGGAC TATAGACAGT
GAACTTTTTG GTCACGAAAA AGGAGCTTTT ACAGGTGCGA CAAGCACGCG TGAAGGTTAT
TTTGAAGTGG CTGATGGCGG GACAATCTTT TTGGATGAAG TTGGAGAATT ACCATTGACT
ACACAAGTAA GATTACTTCG TGTTTTGGAA AATGGTGAAT TCATAAAAGT AGGTTCTTCT
CAGGTTCAAA AAACAAATGT TCGTATTGTT GCAGCAACAA ACGTGAATTT ATTCAACGCA
ATCGAAAAAG GAAAATTCCG TGAAGATTTG TACTATCGTT TAAGTACAGT CGAAATTACT
TTACCTCCTT TAAGAGAAAG AAACGATGAT ATTCATTTAT TATTTAGAAA ATTTGTAGCT
GATTTTGCTC ATAAATACAA AATGCCTCCT TTAAAATTAG ATGACGATGC CGTTCATCTT
CTGCAAAAAT TTAGATGGAA TGGAAACATC CGCCAGCTTC GAAATGTGGC AGAGCAGATT
TCGGTTTTAG AAACGAACCG CGACATTTCA GCTTCTACAC TGTCTTCATA TCTTCCTGCT
GAAGGAAGCA ATCTGCCTTC AGTTATAAGC GACAGTAAAA AGGAAAGCGA TTTTAGCACT
GAAAGAGATA TTTTATACAA AGTACTTTTT GACATGAGAA GCGACTTGAA TGATTTGAAA
AAACTGACTT TAGAATTAAT GAAGAATGGA GGAAGTTCTA AAATGCAGGA TATTAATCCG
AATTTAATTC AAAAGATATA CGGTTCTCAG GAAAATGACA GTGAAATTGA TTTTGAAGAA
GAACCAAGAA CCGCTGTTAT GACGCCGGCA GTTCGTGAAG AAAGCTATCA GATTCCGGAT
CACAATTATT TGTTTGCTGA AACTATTGAA GAAGAAGAAG TTTTACGTTT AGAACAAAAA
GAAATCGAAA TGATCAAAAA ATCATTAGAG AAAAACAAAG GAAAACGAAA AGCTGCAGCT
GATGAACTGG GAATCTCAGA AAGGACTTTA TATAGAAAAA TTAAACAATT TGATTTGTAA
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| Protein sequence | METVQAIKQR FEIIGNDPKL NRAIEKAIQV APTDISVMVT GESGVGKENI PRIIHSLSHR
KHGKYIAVNC GAIPEGTIDS ELFGHEKGAF TGATSTREGY FEVADGGTIF LDEVGELPLT
TQVRLLRVLE NGEFIKVGSS QVQKTNVRIV AATNVNLFNA IEKGKFREDL YYRLSTVEIT
LPPLRERNDD IHLLFRKFVA DFAHKYKMPP LKLDDDAVHL LQKFRWNGNI RQLRNVAEQI
SVLETNRDIS ASTLSSYLPA EGSNLPSVIS DSKKESDFST ERDILYKVLF DMRSDLNDLK
KLTLELMKNG GSSKMQDINP NLIQKIYGSQ ENDSEIDFEE EPRTAVMTPA VREESYQIPD
HNYLFAETIE EEEVLRLEQK EIEMIKKSLE KNKGKRKAAA DELGISERTL YRKIKQFDL
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