Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1811 |
Symbol | murC |
ID | 5091436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2093613 |
End bp | 2094962 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644741224 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001194162 |
Protein GI | 146299571 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.518837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTAA ATCAAATAGA AAACGTTTAT TTTATAGGTA TCGGAGGCAT CGGAATGAGT GCTTTGGCCC GTTATTTCAA ATACATCGGA AAAAAAGTTT CCGGTTATGA TAAAACGCCT TCTATGCTTA CAAGTGAATT GATTGAAAGC GGTATTGATA TTCATTTTGA AGACAACATC AATTTAATTC CATCTAATTA TTATGTAGAG AATACGCTGG TAATTTTTAC GCCTGCGGTT CCAGCCTCAC ATTCAGAATG GCATTATTTT ATTGAAAGAA ATTACCAAAT TAAAAAACGA GCAGAGGTTT TAGGAATTAT CACTAAGGAT ACTTTTAGTT TTGCAGTTGC CGGAACACAC GGTAAAACCA CAACATCTAG TATTTTAGGA CATATTCTAC ACCAAAGCGG GGCAGATGTT ACAGCCTTTG TAGGTGGTAT TGTAGAAAAT TACAATTCAA ACTTAATTGG AACCGGAAAA ACGGTAACCG TTGTAGAGGC TGATGAATTT GATCGTTCAT TCCTTCATTT GCATCCTGAT ATTGCCTGCG TTACCTCAAT GGATGCAGAT CATTTGGATA TTTATGGAAC AAGTGATGCA ATTCAGGCTT CGTTTATTGA ATTTGCCTCG AAAGTAGAAG ATAAAAGCAA ATTGTTTATA ACCAAAGAAT TACCTCTTGA AGGTGTTCAA TGTGCTATAA ATGAAGATGC AGTGTATAAA GCCTATAATG TTCGAATTGA AGATGGAAAT TATGTTTTTG ATGTGCAGAC GCCGTCAGAA ATTATGAAAG ACCTTCGTTT TGGACTTCCG GGAAAACACA ATTTAATGAA TGGGTTAATG GCTATTGCGA TGGCGAAAAC GTATGGCACC CCGACCGACG CCATTGCAAA AGCTATTGCC TCATTTAATG GAATCAGAAG ACGTTTTTCT TATCAAATTA AATCAGATAA GTTAGTTTAT ATAGATGATT ATGCACATCA TCCAACAGAA ATAAATGCTG TTCATCAGGC AGTTAGAGAG TTGTATCCGG GACGTAAAGT TCTGGCAGTT TTTCAGCCGC ATTTGTTTAG CAGAACTAGA GATTTTGCCG ACGGATTTGC CGAAAGCCTG TCTCAGTTTG ATGAAGTGTT TTTGATGGAT ATTTATCCGG CACGCGAATT ACCAATGGAA GGAATTACAT CGCAATGGCT GCTGGATAAA ATGACAAACC CGAACAGAAA AATTGTTGCA AAAGAAGATT TATTAGCGGA AATCAAAGCC AGTGATGCGC CAATAATTGT AACAATAGGG GCTGGTGATA TTGGTGAAAT GGTACCATCA ATTAAAAAAA TGCTGAATGA AAATATTTAA
|
Protein sequence | MNLNQIENVY FIGIGGIGMS ALARYFKYIG KKVSGYDKTP SMLTSELIES GIDIHFEDNI NLIPSNYYVE NTLVIFTPAV PASHSEWHYF IERNYQIKKR AEVLGIITKD TFSFAVAGTH GKTTTSSILG HILHQSGADV TAFVGGIVEN YNSNLIGTGK TVTVVEADEF DRSFLHLHPD IACVTSMDAD HLDIYGTSDA IQASFIEFAS KVEDKSKLFI TKELPLEGVQ CAINEDAVYK AYNVRIEDGN YVFDVQTPSE IMKDLRFGLP GKHNLMNGLM AIAMAKTYGT PTDAIAKAIA SFNGIRRRFS YQIKSDKLVY IDDYAHHPTE INAVHQAVRE LYPGRKVLAV FQPHLFSRTR DFADGFAESL SQFDEVFLMD IYPARELPME GITSQWLLDK MTNPNRKIVA KEDLLAEIKA SDAPIIVTIG AGDIGEMVPS IKKMLNENI
|
| |