| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1756 |
|---|
| Symbol | |
|---|
| ID | 5091823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2031140 |
|---|
| End bp | 2033599 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644741167 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001194107 |
|---|
| Protein GI | 146299516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGGG ACGAATTATA TGTATTGGCC GAAAACTGGT TTAAAAGTCA GGGTTGGAAA
TCTTTTCCAT TCCAGACGCA AACCTGGACT GCTTTTCTGC AGGGAAAAAA CGGTTTATTA
AACGCTCCAA CCGGAAGCGG AAAAACCTAT GCCTTGTGGT TTCCTGTAGT TCTCGATTAC
ATAAAAAAAA ATCCCGATTA TAAAACCAAG CACAAAGCCG GATTAAAAGC CATTTGGATT
ACGCCTTTGC GGGCGCTATC TGTAGAAATA AAACAAGCAG CAGAACGAAT TATTACCGAT
TTAGATCTGC CGTTAACCGT AGGAATTCGT TCAGGAGATA CTTCGCAAAG CGAAAGAGCC
AGACAGAAAA ACAAAATGCC CGATCTTTTA ATTACAACGC CCGAAAGTTT ACAGCTTCTT
TTGGCTTCAA AACAATATGA AAAAACGTTT GCCAACTGCG GTGCAATAAT AGTTGATGAA
TGGCACGAAT TAATGGGAAC CAAACGAGGC GTTCAAATGG AATTGGCACT TTCGAGATTA
AAAACAATTA CACCAAAAAT GCGAATCTGG GGAATTTCGG CAACAATTGG AAATCTCGAA
TTAGCACAAG AAGTTTTATT AGGGCATGAT ACGGAAGCCT ATAAAAATTC AGTTTTGATA
AAAGCACATA TCAATAAAAA GATTAAGATA GAATCAATTC TGCCTGAGAA AATGGAAACT
TATCCGTGGC GCGGACACAT GGGTTTGCAT TTGATTGATG AGGTTGCGAA GATAATCCGA
AAGAGCAAAA CGACTTTAAT TTTTACCAAT GTACGTTCGG CCTGCGAAAT TTGGTTTCAG
GCCATTTTAG AAAAATATCC GGAATTTGCA GGAGAAATGG CGATGCATCA CGGAAGCATA
AGCAGAGAAA CCCGTTTGTG GGTGGAGGAC GCCATTCGAA ACGAAGAATT AAAAGTCGTA
GTCTGCACTT CGAGTTTAGA TCTTGGTGTC GATTTTGCGC CTGTTGAAAC CATTATTCAG
GTTGGCGGAC CAAAAGGTGT TGCCAGATTT TTGCAGAGAG CAGGAAGAAG CGGGCACCAG
CCGGGGAAAG AAAGCATGAT TTATTTTCTC GCCACACATG CAATGGAATT AATTGAAGCT
TCGGCATTAA AAAAAGCGGT TGCCCAAACT GTTGTCGAAG ATCGAATGCC GTATTTAAAC
AGTTGGGACG TTTTGGTTCA ATATCTAAAT ACACTGGCAG TTTCTGACGG ATTTTTTCCG
GATGAAATTT ATGAAGAAGT TAAAACAACT TTCTGTTATC AAAATATAAC CAAAGAAAAC
TGGAACTGGA TTTTAAATTT CATTACCAAC GGAAGTCAGA GCTTGCAGGC TTACGACGAA
TTTAAAAAAG TAGAAATTGA AGCTGACGGG CGTTATAAAA TCAACAGCCG TTTTATTGCC
ATGCATCATC GTATGCAAAT GGGAACAATT GTGGGCGATG CGGTTTTGAA TGTAAAATTT
TTAAGCGGCG GTTTTATTGG TACAATTGAA GAATGGTTTG CTTCGAAATT ACAGAGAGGC
GATGTTTTTA CTTTTGCCGG AAGGCGCCTC GAATTGTTTC AAATTAAAAA CATGCAGGTT
TTAGTTCGAA AAGCTGATCC TAAAAAAACA GCCAGAGTGG TAAGCTGGAT GGGAGGCCGA
ATGACGTTAT CAGCACAGAT GAGTGAACTG CTTCGGGAAG AATTATATGC GGCAAATACA
GATCATCTAA CTCCTGAATT AAAAGCTTTA AAACCTATTT TTGACAGGCA GAGAAAAGAA
AGTATTGTAC CCAATAACAA TGAATTTTTA ATCGAAACGT TTAAAACAAG AGAAGGTTAT
CACGCTATTT TTTATCCATT TGAAGGACGT TATGTTCACG AAGCTATGGC AAGTTTAATT
TCGTATCGAA TCAGTTTATT GTCGCCAATT ACGTTTTCAC TGGCCTATAA CGATTACGGA
TTCGAATTGC TTTCTGATCA GGAAATAGAT ATGCAGTCTG TTTTTGATAA TAATTTGTTT
ACGACAGAAT ATGTACATCA TGATTTGCAG AAAAGTTTAA ACGCAACCGA AATGGCGCGC
CGAAAATTTC GTGATATTGC CGTAATTGCT GGTTTGGTTT TTACGGGAAT GCCCGGAAAA
CCTGTTAAAA CAAAACATTT GCAAAGCGGT TCGCAATTGC TTTTTGAGGT TTTTAGAGAT
TATGAACCCG ATAATTTATT ATTACAGCAG GCTTATACAG AAACCTTTGA ACATCAGTTA
GAAGAAGGAC GTTTGATTCA GGCAATGGAA AGAATAAACA ATCAGGCGAT TGTCTGGAAA
CAATGTAAAA AGCCAACGCC GTTTAGTTTT CCAATAATTA CAGATCGTTT ACGCGAAAAA
ATATCAAGTG AGACCCTGCA GGAAAGAATA AAGAAAATGA CCGCGAGTTA CATGAAATAA
|
|---|
| Protein sequence | MNRDELYVLA ENWFKSQGWK SFPFQTQTWT AFLQGKNGLL NAPTGSGKTY ALWFPVVLDY
IKKNPDYKTK HKAGLKAIWI TPLRALSVEI KQAAERIITD LDLPLTVGIR SGDTSQSERA
RQKNKMPDLL ITTPESLQLL LASKQYEKTF ANCGAIIVDE WHELMGTKRG VQMELALSRL
KTITPKMRIW GISATIGNLE LAQEVLLGHD TEAYKNSVLI KAHINKKIKI ESILPEKMET
YPWRGHMGLH LIDEVAKIIR KSKTTLIFTN VRSACEIWFQ AILEKYPEFA GEMAMHHGSI
SRETRLWVED AIRNEELKVV VCTSSLDLGV DFAPVETIIQ VGGPKGVARF LQRAGRSGHQ
PGKESMIYFL ATHAMELIEA SALKKAVAQT VVEDRMPYLN SWDVLVQYLN TLAVSDGFFP
DEIYEEVKTT FCYQNITKEN WNWILNFITN GSQSLQAYDE FKKVEIEADG RYKINSRFIA
MHHRMQMGTI VGDAVLNVKF LSGGFIGTIE EWFASKLQRG DVFTFAGRRL ELFQIKNMQV
LVRKADPKKT ARVVSWMGGR MTLSAQMSEL LREELYAANT DHLTPELKAL KPIFDRQRKE
SIVPNNNEFL IETFKTREGY HAIFYPFEGR YVHEAMASLI SYRISLLSPI TFSLAYNDYG
FELLSDQEID MQSVFDNNLF TTEYVHHDLQ KSLNATEMAR RKFRDIAVIA GLVFTGMPGK
PVKTKHLQSG SQLLFEVFRD YEPDNLLLQQ AYTETFEHQL EEGRLIQAME RINNQAIVWK
QCKKPTPFSF PIITDRLREK ISSETLQERI KKMTASYMK
|
|---|
| |