| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1749 |
|---|
| Symbol | gidB |
|---|
| ID | 5093091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2023774 |
|---|
| End bp | 2024403 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644741160 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_001194100 |
|---|
| Protein GI | 146299509 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGA TATTGAAATA TTTTCCCAAT TTGACCGATC TTCAAATCGA ACAATTTCAA
AAATTAGACT TTTTATACCA CAATTGGAAT GAAAAAATCA ATGTTATTTC ACGCAAAGAC
ATTGATTCAT TATATACAAA ACACATTTTA CATTCTTTAG GAATTGCTAA AGTTATGAAA
TTCGAACCTG GAACAACAGT TCTGGATGTT GGAACAGGAG GAGGTTTTCC TGGAATTCCG
TTAGCGATTC TTTTTCCAGA AACTCGTTTT TATTTGATTG ATGTTATTGC TAAAAAAATA
AAAGTGGTTC AGGGCGTTGT AGATGCATTA GAATTAAAAA ATGTAAAAGC AGAACAAAAA
CGTGCCGAAT TGGTAAAAGG TGATTTCGAT TTTATTGTGA GCCGTGCCGT AACTAATATG
CCTGATTTTG TTTCTTGGAT AAAAGATAAA ATTAAAAAGC AGCACAAGCA TAAACTAAAA
AATGGGATTC TTTATCTTAA AGGTGGCGAT TTGTCTGAAG AACTAAAAGA TTTTCCTGCT
GCAACCTTAT ATGATTTATC AGAGATATTT GAAGATGAAT TTTTTGAAAC TAAAAAAGTG
GTTCATCTTC CTTTAAAGTT TAAACCTTAG
|
|---|
| Protein sequence | MDEILKYFPN LTDLQIEQFQ KLDFLYHNWN EKINVISRKD IDSLYTKHIL HSLGIAKVMK
FEPGTTVLDV GTGGGFPGIP LAILFPETRF YLIDVIAKKI KVVQGVVDAL ELKNVKAEQK
RAELVKGDFD FIVSRAVTNM PDFVSWIKDK IKKQHKHKLK NGILYLKGGD LSEELKDFPA
ATLYDLSEIF EDEFFETKKV VHLPLKFKP
|
|---|
| |