Gene Fjoh_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1748 
Symbol 
ID5093090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2022569 
End bp2023666 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content35% 
IMG OID644741159 
Productlinoleoyl-CoA desaturase 
Protein accessionYP_001194099 
Protein GI146299508 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACA CGGCTCCAAC TTTTGCAAGG CAAGACAATC TGAAGTTTTT CAGAACACTT 
AATTCTCGGG TAAACAATTA CTTCAAGGAG AATAATATTC AGAAAACCGG AAATTGGAAA
TTACATTTAA AAGCTGTTAT TCTGTTTGCA GTTTTTCTAA CTCCTTATTT CTTAATCCTT
ACGCTTAATA TGCCTTTTTG GTTAATGTTG CTGCTTTCTA TTATTATGGG AGTTGGAATG
GCAGGTGTAG GAATGAATGT AATGCACGAC GGAAATCACG GTTCTTACTC TAATAAAAGC
TGGATCAACA AATTCATGGG CGGAACAATT TATGTTCTGG CTGGAAATGT TTACAACTGG
CAGGTACAGC ATAATGTGCT TCATCATACT TATACTAATA TTCCTGGGCA TGACGAAGAT
CTGGATGCCG GAAGAATTAT TCGTTTTACA GAGCATGCAG AATGGCATCG TTTTCACCGT
TTCCAGCATT ATTATTCTGT TTTCTTATAT GGGTTACTAA CTTTTAATTG GGCTTTAACT
ACTGATTTTA AGCAAATGCG TAATTACCTT AAAAGAAAAC TTTCTTATGG TGAACCAAAA
AGTCCTAAAA TTTTATGGAC AACCCTTATT ATCACTAAAA TGATTTATGT GTCAATCTGG
ATTGTTTTAC CAATTTTAAT TGGAATTACC TGGTGGAAAG TTCTTCTTGG CTTTTTCCTA
ATGCACTATA CAGCAGGTTT AATTTTAAGC ATTGTGTTTC AGCTGGCGCA TGTTGTAGAT
CATACTACAA ATCCAACTCC AAATGATTTA GGCGAAATGG ATAATACCTG GGCTATTCAC
CAATTGTATA CTACAACTAA TTTTGCTCCA AAAAACGCAA TCGTAAATTG GTATACAGGC
GGATTAAACC ATCAAATCGA ACATCATATT TTTCCAAATA TCAGTCACAT TCATTATGGC
AAAATTGCAA AAATTGTAAA AGAAACCGCA AAGGAATGCA ACTTACCGTA TTATGAATAC
AAAACAATGA GAAGCGCCGT TGCTGCTCAC TTCAAACATT TACGTGACTT AGGAATGAAA
CCTGAATTAG CAGTTTAG
 
Protein sequence
MNNTAPTFAR QDNLKFFRTL NSRVNNYFKE NNIQKTGNWK LHLKAVILFA VFLTPYFLIL 
TLNMPFWLML LLSIIMGVGM AGVGMNVMHD GNHGSYSNKS WINKFMGGTI YVLAGNVYNW
QVQHNVLHHT YTNIPGHDED LDAGRIIRFT EHAEWHRFHR FQHYYSVFLY GLLTFNWALT
TDFKQMRNYL KRKLSYGEPK SPKILWTTLI ITKMIYVSIW IVLPILIGIT WWKVLLGFFL
MHYTAGLILS IVFQLAHVVD HTTNPTPNDL GEMDNTWAIH QLYTTTNFAP KNAIVNWYTG
GLNHQIEHHI FPNISHIHYG KIAKIVKETA KECNLPYYEY KTMRSAVAAH FKHLRDLGMK
PELAV