Gene Fjoh_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1717 
Symbol 
ID5093059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1987669 
End bp1988616 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content34% 
IMG OID644741126 
Productalpha/beta hydrolase fold 
Protein accessionYP_001194068 
Protein GI146299477 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TATTTCTGTT TACTGCTTTT CTGTTTTTGA CCATTTTAAA TGCTCAAAAC 
ACAAAACAAG ATACTTTTAA AGAAACAAAT GTTACTTTAA AAATCAACAT CGATCAGCTT
TATGGTACAC TTACTGTTCC AGACGATGTA AAGAAATGTC CGGTTGCTTT AATAATTGCA
GGTTCAGGGC CAACAGACAG AAACGGAAAT AATCCGATGA TGAAAAACAA TTCCTTAAAA
ATGCTGGCCG AAGCGCTGGC TAAAAACGGA ATTGCTTCTT TACGATTTGA TAAAAGAGGA
ATCGGTGAAA GCAAAGCATC GGCGGTAACA GAATCGAGTC TGGTTTTTGA AAATTATACC
GAAGATGCCA AAAGCTGGAT TAATTTTTTA AAACAAGATA AACGTTTTAC ACAGCTAACG
GTTATTGGCC ACAGCGAAGG TTCTTTAATT GGAATGATTG CGGGTGCAAA AGCAAATAAA
TTTATTTCGA TTGCCGGAGC CGGAGAATCT GCTGATAAAC TTTTAAAATC ACAGATTTCT
TCTAAATCGA ATAAACAAGT TGAAGACATG ACGTTTCCTA TTATTGACAG TCTGAAGGCC
GGAAATAAGG TAAACAAAGT CGATCCGCTT TTAAATTCAC TTTTCAGAGC CAGTATTCAG
CCCTATTTGA TTTCCTGGTT TAAATACGAT CCGCAAATCG AAATTAAGAA ACTGACTGTT
CCGGTTTTAA TAATTCAGGG AAATAATGAT TTACAGGTTT CAGTTAAAGA CGCCGAAAAT
CTATCTCAGG CCAATAAAAA TGCTGAATTG GTTATTATTG ATAAAATGAA CCATGTTTTA
AAAATTATTG ACGGTGATAA ACAGGCTAAT ATGGCCAGTT ATAATAATGA AAACCTTCCT
GTTTCTGAAA CAATGGTAAA CAAGATTGTT TCATTTATAA AGAAATAG
 
Protein sequence
MKKIFLFTAF LFLTILNAQN TKQDTFKETN VTLKINIDQL YGTLTVPDDV KKCPVALIIA 
GSGPTDRNGN NPMMKNNSLK MLAEALAKNG IASLRFDKRG IGESKASAVT ESSLVFENYT
EDAKSWINFL KQDKRFTQLT VIGHSEGSLI GMIAGAKANK FISIAGAGES ADKLLKSQIS
SKSNKQVEDM TFPIIDSLKA GNKVNKVDPL LNSLFRASIQ PYLISWFKYD PQIEIKKLTV
PVLIIQGNND LQVSVKDAEN LSQANKNAEL VIIDKMNHVL KIIDGDKQAN MASYNNENLP
VSETMVNKIV SFIKK