Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1696 |
Symbol | |
ID | 5091155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1965015 |
End bp | 1967285 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644741105 |
Product | TonB-dependent receptor |
Protein accession | YP_001194047 |
Protein GI | 146299456 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAAAAT CTGTTATACT CTTTTTTTTA TTCTGTTTTT CAAACATTTT TGCGCAGTCA AATATAAAGA TCACAGGAAA TGTAAAATCT TCTGACAACC AGACTCTTGC AGGTGTCCAT GTTTTATTTG AAATAAATCA AAAACAAAAA CATGCAGTTA CCGACACTTT AGGTAACTTT TTTGAAAGTA TTCCTGCAGG GGATATGGCT TTAACGATTA ATCAGTTAGG TTTTACTTCA AAAACAATTT ACTGCAGTGT TCAAAAGGAC ACCATGTTTT CTATTATTTT AGAAAAAGAT ATTGCTCAGT TAAAAGAAGT AATTATTTCA AATGATAAGA AAAACGGAAT TAAAACCTTG TCAGGCGGAA AACTTTCTTT TAATCTAAAA GACCTAAACT CCGTTCCAAC GCTTTTAGGA ACAACAGATG TTATAAAACT TTTACAGCTA ACGCCCGGAG TGCAAAATTC AGGCGATGCA AATGGTTATT TATACGTTAG GGGCGGCGAT CCCGGACACA ACGCGATTTT GTATAATGAA ACGCCAATTT ATGGAATGTC GCATTTACTG GGAATATTTC CTTTCTACAA TACAGATCAT ATTAAAGATA TAGAATTTGA TAAATCAAGC TCAAATGCAA AATACGGCGG ACGTTTGAGT TCTACAACGC TTTTAAATAC CAATAAAAAA ATACCTTCTG AATTCTCAAT TCAGGGAAAT GCCGGAATTT TGGCTTCGCA ATTAACATTA GCAGTTCCGA TTAACGATAA AAACGGTTTC TATATTTCTG GCAGAAAAAC GTATATTGAT GAAGTTGTGG GGCCGTTATT AAAATCAGAT TCAGAAAACG ATGTTCAGGA TATGAAATAT GGTTTTTCGG ATGCAAACTT TACTTTTTTA TCTCAAATTT CTACAAAGAA TTTATTTTCA TTTGATGCCT TTTATAGTGG AGATAAATTG AAAGTTAAAG ATGGAGATCT GGCACTTCAA ACCAATTTAA AATGGAATAA CTTTACAGTA TCGCCATCTT TAACGACGAT ATTTTCTCCT AAAGTAAGCA TGTCTAATTC TGTTTATTTT AGTCATTATT CTAATGATTT AGATATGGAA CAGGCAGCGA TTCATTTTGG GGTTTCTTCT TATGTAAAGG ATTTTGGGTT TGCAAATGCA GTTCGATTTT CGATTCATAA TATTCCATTT GAATCAGGAT TGCAATATGT TTATCACAAT TTACAGCCTC AAAAAGTAAA TGTAGAAAAC CTGACAACGA TTGATAATAA TTCACAAAGT GTGATTAATG CCAATGAAGC AGCAATTTTT GCAAACGCAA AACCCAAATT GTTTGAGAAT GTAACCGCAG ATTTAGGTCT TCGAATTAAT TATTACACTT CTGGAGCAAA TTCGTATCTG CATTTTCAGC CGAGAGCGGT ATTGAATTAT TATGCAAATG AAAAATATTC GTTTTATGCT TCTTACAACA GACAGTATCA ATATTTGAGT TTAATTACAA CTTCAAGCGT AGGTATCCCG ACTGATTTTT GGATTGCAAG TTCGGATGGT ATTAAGCCGC AGTCTTCAAA TGAATTTTCA ATTGGATCAA ACCAAAATAT TACCAGAAAT TTTTCTTCTT CTTTTGGAGG ATTTTACCGT TCGATGAAAA ATCTGCTCGA ATACCCTTAT GGAATAACGC AGTTTAATGA AACTACAACT TTAAAAAATG ATTTGTATGT GGGCGAAGGG AAAGCGTATG GATTTGAAAT GATGCTCAAA AAAAGCAACG GAAAATTTAC GGGCTGGCTT AGTTATACCT TAAGCTGGTC TGAACGAAAT TTTGATGAAT TAAATAACGG AAAAACATAT TTTGCAAAGT ATGACAGAAG GCATAGTCTT TCTGTAGTGG GAATGTACGA TTTAAACGCA AAGTGGAATT TTGGAGTTAC CCAGATATTT GGTTCCGGAA ATCGATTTAC AATGCCGACT TCCTGGTATT TTATAAACAA TAATCCGGTG AAAGAATATT CAGGATATAA TAATGCTCAA ATGCCAAATT ATATTAGAAC AGACATCTCT GCCAATTATT ATTTTATAAA AACAGCAAAA AAAGAAAGCG CATTAAATTT CTCTATTTAC AATACTTTCA ATATATCAAA TCCTATTTAT GTGGTTTTAA ATGTTAGAAC TACTGATAAT AAAAATGAAA TATTAGTTAC ACAGGATAAA AAGGTTTTAT ATCGAATTTT GCCTTCAATA AGCTGGCGAT TTAAATTTTA A
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Protein sequence | MSKSVILFFL FCFSNIFAQS NIKITGNVKS SDNQTLAGVH VLFEINQKQK HAVTDTLGNF FESIPAGDMA LTINQLGFTS KTIYCSVQKD TMFSIILEKD IAQLKEVIIS NDKKNGIKTL SGGKLSFNLK DLNSVPTLLG TTDVIKLLQL TPGVQNSGDA NGYLYVRGGD PGHNAILYNE TPIYGMSHLL GIFPFYNTDH IKDIEFDKSS SNAKYGGRLS STTLLNTNKK IPSEFSIQGN AGILASQLTL AVPINDKNGF YISGRKTYID EVVGPLLKSD SENDVQDMKY GFSDANFTFL SQISTKNLFS FDAFYSGDKL KVKDGDLALQ TNLKWNNFTV SPSLTTIFSP KVSMSNSVYF SHYSNDLDME QAAIHFGVSS YVKDFGFANA VRFSIHNIPF ESGLQYVYHN LQPQKVNVEN LTTIDNNSQS VINANEAAIF ANAKPKLFEN VTADLGLRIN YYTSGANSYL HFQPRAVLNY YANEKYSFYA SYNRQYQYLS LITTSSVGIP TDFWIASSDG IKPQSSNEFS IGSNQNITRN FSSSFGGFYR SMKNLLEYPY GITQFNETTT LKNDLYVGEG KAYGFEMMLK KSNGKFTGWL SYTLSWSERN FDELNNGKTY FAKYDRRHSL SVVGMYDLNA KWNFGVTQIF GSGNRFTMPT SWYFINNNPV KEYSGYNNAQ MPNYIRTDIS ANYYFIKTAK KESALNFSIY NTFNISNPIY VVLNVRTTDN KNEILVTQDK KVLYRILPSI SWRFKF
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