Gene Fjoh_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1696 
Symbol 
ID5091155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1965015 
End bp1967285 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content32% 
IMG OID644741105 
ProductTonB-dependent receptor 
Protein accessionYP_001194047 
Protein GI146299456 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAAAT CTGTTATACT CTTTTTTTTA TTCTGTTTTT CAAACATTTT TGCGCAGTCA 
AATATAAAGA TCACAGGAAA TGTAAAATCT TCTGACAACC AGACTCTTGC AGGTGTCCAT
GTTTTATTTG AAATAAATCA AAAACAAAAA CATGCAGTTA CCGACACTTT AGGTAACTTT
TTTGAAAGTA TTCCTGCAGG GGATATGGCT TTAACGATTA ATCAGTTAGG TTTTACTTCA
AAAACAATTT ACTGCAGTGT TCAAAAGGAC ACCATGTTTT CTATTATTTT AGAAAAAGAT
ATTGCTCAGT TAAAAGAAGT AATTATTTCA AATGATAAGA AAAACGGAAT TAAAACCTTG
TCAGGCGGAA AACTTTCTTT TAATCTAAAA GACCTAAACT CCGTTCCAAC GCTTTTAGGA
ACAACAGATG TTATAAAACT TTTACAGCTA ACGCCCGGAG TGCAAAATTC AGGCGATGCA
AATGGTTATT TATACGTTAG GGGCGGCGAT CCCGGACACA ACGCGATTTT GTATAATGAA
ACGCCAATTT ATGGAATGTC GCATTTACTG GGAATATTTC CTTTCTACAA TACAGATCAT
ATTAAAGATA TAGAATTTGA TAAATCAAGC TCAAATGCAA AATACGGCGG ACGTTTGAGT
TCTACAACGC TTTTAAATAC CAATAAAAAA ATACCTTCTG AATTCTCAAT TCAGGGAAAT
GCCGGAATTT TGGCTTCGCA ATTAACATTA GCAGTTCCGA TTAACGATAA AAACGGTTTC
TATATTTCTG GCAGAAAAAC GTATATTGAT GAAGTTGTGG GGCCGTTATT AAAATCAGAT
TCAGAAAACG ATGTTCAGGA TATGAAATAT GGTTTTTCGG ATGCAAACTT TACTTTTTTA
TCTCAAATTT CTACAAAGAA TTTATTTTCA TTTGATGCCT TTTATAGTGG AGATAAATTG
AAAGTTAAAG ATGGAGATCT GGCACTTCAA ACCAATTTAA AATGGAATAA CTTTACAGTA
TCGCCATCTT TAACGACGAT ATTTTCTCCT AAAGTAAGCA TGTCTAATTC TGTTTATTTT
AGTCATTATT CTAATGATTT AGATATGGAA CAGGCAGCGA TTCATTTTGG GGTTTCTTCT
TATGTAAAGG ATTTTGGGTT TGCAAATGCA GTTCGATTTT CGATTCATAA TATTCCATTT
GAATCAGGAT TGCAATATGT TTATCACAAT TTACAGCCTC AAAAAGTAAA TGTAGAAAAC
CTGACAACGA TTGATAATAA TTCACAAAGT GTGATTAATG CCAATGAAGC AGCAATTTTT
GCAAACGCAA AACCCAAATT GTTTGAGAAT GTAACCGCAG ATTTAGGTCT TCGAATTAAT
TATTACACTT CTGGAGCAAA TTCGTATCTG CATTTTCAGC CGAGAGCGGT ATTGAATTAT
TATGCAAATG AAAAATATTC GTTTTATGCT TCTTACAACA GACAGTATCA ATATTTGAGT
TTAATTACAA CTTCAAGCGT AGGTATCCCG ACTGATTTTT GGATTGCAAG TTCGGATGGT
ATTAAGCCGC AGTCTTCAAA TGAATTTTCA ATTGGATCAA ACCAAAATAT TACCAGAAAT
TTTTCTTCTT CTTTTGGAGG ATTTTACCGT TCGATGAAAA ATCTGCTCGA ATACCCTTAT
GGAATAACGC AGTTTAATGA AACTACAACT TTAAAAAATG ATTTGTATGT GGGCGAAGGG
AAAGCGTATG GATTTGAAAT GATGCTCAAA AAAAGCAACG GAAAATTTAC GGGCTGGCTT
AGTTATACCT TAAGCTGGTC TGAACGAAAT TTTGATGAAT TAAATAACGG AAAAACATAT
TTTGCAAAGT ATGACAGAAG GCATAGTCTT TCTGTAGTGG GAATGTACGA TTTAAACGCA
AAGTGGAATT TTGGAGTTAC CCAGATATTT GGTTCCGGAA ATCGATTTAC AATGCCGACT
TCCTGGTATT TTATAAACAA TAATCCGGTG AAAGAATATT CAGGATATAA TAATGCTCAA
ATGCCAAATT ATATTAGAAC AGACATCTCT GCCAATTATT ATTTTATAAA AACAGCAAAA
AAAGAAAGCG CATTAAATTT CTCTATTTAC AATACTTTCA ATATATCAAA TCCTATTTAT
GTGGTTTTAA ATGTTAGAAC TACTGATAAT AAAAATGAAA TATTAGTTAC ACAGGATAAA
AAGGTTTTAT ATCGAATTTT GCCTTCAATA AGCTGGCGAT TTAAATTTTA A
 
Protein sequence
MSKSVILFFL FCFSNIFAQS NIKITGNVKS SDNQTLAGVH VLFEINQKQK HAVTDTLGNF 
FESIPAGDMA LTINQLGFTS KTIYCSVQKD TMFSIILEKD IAQLKEVIIS NDKKNGIKTL
SGGKLSFNLK DLNSVPTLLG TTDVIKLLQL TPGVQNSGDA NGYLYVRGGD PGHNAILYNE
TPIYGMSHLL GIFPFYNTDH IKDIEFDKSS SNAKYGGRLS STTLLNTNKK IPSEFSIQGN
AGILASQLTL AVPINDKNGF YISGRKTYID EVVGPLLKSD SENDVQDMKY GFSDANFTFL
SQISTKNLFS FDAFYSGDKL KVKDGDLALQ TNLKWNNFTV SPSLTTIFSP KVSMSNSVYF
SHYSNDLDME QAAIHFGVSS YVKDFGFANA VRFSIHNIPF ESGLQYVYHN LQPQKVNVEN
LTTIDNNSQS VINANEAAIF ANAKPKLFEN VTADLGLRIN YYTSGANSYL HFQPRAVLNY
YANEKYSFYA SYNRQYQYLS LITTSSVGIP TDFWIASSDG IKPQSSNEFS IGSNQNITRN
FSSSFGGFYR SMKNLLEYPY GITQFNETTT LKNDLYVGEG KAYGFEMMLK KSNGKFTGWL
SYTLSWSERN FDELNNGKTY FAKYDRRHSL SVVGMYDLNA KWNFGVTQIF GSGNRFTMPT
SWYFINNNPV KEYSGYNNAQ MPNYIRTDIS ANYYFIKTAK KESALNFSIY NTFNISNPIY
VVLNVRTTDN KNEILVTQDK KVLYRILPSI SWRFKF