| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1674 |
|---|
| Symbol | |
|---|
| ID | 5091133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1943508 |
|---|
| End bp | 1944320 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644741083 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001194025 |
|---|
| Protein GI | 146299434 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.702305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCA ATCCTGAACA ATTAAGCAGT TACGCGGCGA AATTTATTAA TCTTTTAATT
GATTATTCGC CAAAATTAAT CTCAGCATTT CTAGTTTTAT TTGTTGGTTT ATATGCCATA
AAATTCATCA ACAGAATTAT TAGAAAAATA ATGGAAAAGA GAAATCTGGA TCCAACATTG
ACCAAATTTC TTGCTGATAT TTTACTATGG GCTTTACGAA TTTTATTATT TGTAACCTTT
ATTTCAAACC TCGGAATCGA GACTTCTTCA TTCGTAGCCA TTTTAGGTGC TATGGGTCTT
GCAGTTGGTT TATCACTGCA GGGATCACTT TCTAATTTTG CCGGCGGTAT GTTAATTATC
GTTTTTAAGC CTTTTAAAGT TGGCGATACG ATCGAGGCTC AAGGTGTTAT AGCAACGGTG
CTGGAAATTC AAATTTTTGT TACCAAAATG CTTACCGGAA ACAATCAGAC CGTTTTTGTG
CCAAATGGAG CTTTGTCAAA CGGAACAATT ATTAATTACT CTATGCAGGG AGAAAGAAGA
GCTGATCTAA CTTTTTCAGT TTCTTATGAT TCTGATATTA AAAAAGCAAA AGATATTCTT
TTGGAGGTTT TAAACAAAAA TCCAAAAGTG CTTCAAAAGC CTGCTCCGGA AGTTTTTGTT
AAAAATTTAT CGGCAAGTTC TGTAGATTTT GCAGTACGTC CGTGGGCGAA GAATGCTAAT
TATGGAGCTG TTTTTTCTGA AACGCTCGAA GATTGTAAAA CAGCTTTAGA TCAGGCAGGA
ATTTCTGTTC AGCCTTTTAC ACTTCAAAAA TAA
|
|---|
| Protein sequence | MYINPEQLSS YAAKFINLLI DYSPKLISAF LVLFVGLYAI KFINRIIRKI MEKRNLDPTL
TKFLADILLW ALRILLFVTF ISNLGIETSS FVAILGAMGL AVGLSLQGSL SNFAGGMLII
VFKPFKVGDT IEAQGVIATV LEIQIFVTKM LTGNNQTVFV PNGALSNGTI INYSMQGERR
ADLTFSVSYD SDIKKAKDIL LEVLNKNPKV LQKPAPEVFV KNLSASSVDF AVRPWAKNAN
YGAVFSETLE DCKTALDQAG ISVQPFTLQK
|
|---|
| |