Gene Fjoh_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1667 
Symbol 
ID5091126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1935630 
End bp1936331 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content35% 
IMG OID644741076 
ProductABC transporter related 
Protein accessionYP_001194018 
Protein GI146299427 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAA TCAAAGATTT GCACAAATCC TATAAAATGG GAAGTTCGGA GCTGCATGTG 
TTGAAAGGAA TAAATTTTAA TATTGCCGAA GGTGAATTAG TTGCCATTAT GGGATCATCG
GGATCTGGAA AATCTACGCT TCTTAACATT TTAGGAATTC TTGACGAGGC CGACTCTGGT
AGTTATATTT TAGATAAAAC CCCAATTAAA AAACTGAACG AAACTCTAGC TTCAAAATAC
AGAAACAAAT TTCTGGGTTT TGTTTTTCAG TCTTTCAATT TAATAAATTA TAAATCTGCA
TTAGACAACG TTGCGATGCC TTTGTATTAT CAAGGTGTAA AGAGAAAAGA ACGTTATGAA
ATTGCAATGA AATATCTTGA AAAAGTTGGT TTAGGATCGC ATTCTCATCA CTTGCCTAAC
GAACTTTCTG GAGGACAGAA ACAACGTGTG GCGATTGCAA GGGCATTGGC ATCTAATCCA
AAAGTTTTGC TTGCCGATGA GCCTACAGGA GCCTTAGATA CTAAAACTTC TTATGAGGTT
ATGGAGTTAA TTCAAGGAAT TAATGACGAA GGCAAAACGA TTTTAATCGT TACACACGAA
CCAGATATTG CCGCAATGTG CAAAAGAAAT GTGGTCCTGA AAGACGGATT AATTATCGAT
GATAAATTAG TAGAACAAGT TAGAGCTTCA TCTTATGTTT AA
 
Protein sequence
MIEIKDLHKS YKMGSSELHV LKGINFNIAE GELVAIMGSS GSGKSTLLNI LGILDEADSG 
SYILDKTPIK KLNETLASKY RNKFLGFVFQ SFNLINYKSA LDNVAMPLYY QGVKRKERYE
IAMKYLEKVG LGSHSHHLPN ELSGGQKQRV AIARALASNP KVLLADEPTG ALDTKTSYEV
MELIQGINDE GKTILIVTHE PDIAAMCKRN VVLKDGLIID DKLVEQVRAS SYV