Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1667 |
Symbol | |
ID | 5091126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1935630 |
End bp | 1936331 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644741076 |
Product | ABC transporter related |
Protein accession | YP_001194018 |
Protein GI | 146299427 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAA TCAAAGATTT GCACAAATCC TATAAAATGG GAAGTTCGGA GCTGCATGTG TTGAAAGGAA TAAATTTTAA TATTGCCGAA GGTGAATTAG TTGCCATTAT GGGATCATCG GGATCTGGAA AATCTACGCT TCTTAACATT TTAGGAATTC TTGACGAGGC CGACTCTGGT AGTTATATTT TAGATAAAAC CCCAATTAAA AAACTGAACG AAACTCTAGC TTCAAAATAC AGAAACAAAT TTCTGGGTTT TGTTTTTCAG TCTTTCAATT TAATAAATTA TAAATCTGCA TTAGACAACG TTGCGATGCC TTTGTATTAT CAAGGTGTAA AGAGAAAAGA ACGTTATGAA ATTGCAATGA AATATCTTGA AAAAGTTGGT TTAGGATCGC ATTCTCATCA CTTGCCTAAC GAACTTTCTG GAGGACAGAA ACAACGTGTG GCGATTGCAA GGGCATTGGC ATCTAATCCA AAAGTTTTGC TTGCCGATGA GCCTACAGGA GCCTTAGATA CTAAAACTTC TTATGAGGTT ATGGAGTTAA TTCAAGGAAT TAATGACGAA GGCAAAACGA TTTTAATCGT TACACACGAA CCAGATATTG CCGCAATGTG CAAAAGAAAT GTGGTCCTGA AAGACGGATT AATTATCGAT GATAAATTAG TAGAACAAGT TAGAGCTTCA TCTTATGTTT AA
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Protein sequence | MIEIKDLHKS YKMGSSELHV LKGINFNIAE GELVAIMGSS GSGKSTLLNI LGILDEADSG SYILDKTPIK KLNETLASKY RNKFLGFVFQ SFNLINYKSA LDNVAMPLYY QGVKRKERYE IAMKYLEKVG LGSHSHHLPN ELSGGQKQRV AIARALASNP KVLLADEPTG ALDTKTSYEV MELIQGINDE GKTILIVTHE PDIAAMCKRN VVLKDGLIID DKLVEQVRAS SYV
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