Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1647 |
Symbol | |
ID | 5091106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1910260 |
End bp | 1912260 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741056 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001193998 |
Protein GI | 146299407 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTTA AAAAAATACT TTTTCCCATT TTGTTGCTTT GCTTTTTTAT GGCAGATGCC CAAACGGCCA GTATAAAAAA TGCAGATAAA AAATACGACA GTTACGCTTA CGCGGATGCT ATAAAAGCCT ATGAAAAATT AGTTGAAAAA GGAGTTAGAG AAGAAAGAAT ATTTCAAAGA CTTGGAAATT CCTATTATTT CATTGGCGAA TTAAAAGACG CCTTAAAATA CTATCAGGAA TTATTCAGTA TTAATGAAAA TCAGGAAGCA GACTATTTGT ATAAATATGC TCAATGCTTA AAATCAGAAG GGAATTATAC TAAAGCCGAT GAAATTTTAG AGAAATTCTC CCAAAAAGCA CCTTCAGATA AAAGAGTCGT TTTATTCTTA AAAAACAGAA ATTATTTAGA AGATATTAAA TCAAATTCAG GACGTTTTGA TATTGCAGAT GCCGGAATCA ACTCAAAAGA TTCAGATTAC GGAAGCACTA TTTTAGACAA TAAATTAGTC TTTACATCGG CAAGAGATAC AGGTTCTATT ATCAAAAAGA ATTTTAAATG GACAAATAAA GCCATTTCAA CTTTATATGC TGTAGATTTA AATCCAGACG GGAGCATTGG AAAACCAATG TTGTTTCATA AACAAAATCT GCAGGTTAAC TTCAATCAGT CTACTCCCGT TTTTACAAAA GATGGTAAAA CCATGTATTT TACCAGAAAT AACTCAGTAG ACGGAAAAAG AAAACAAAAT GAAAACAAGG TCACATTTTT AAAACTATAC AAAGCCGTTT TAATTAATAA CGAATGGAAA GAAGTACAAG AACTTCCGTT TAACAGTGAC GAATACAGCG TAGCGCATCC AGCTTTAAGT GTAGACGAAA AAACATTATA TTTTGCATCA GATATGCCGG GAACGTTAGG ACTTTCGGAT ATCTATAAAG TAAGCATACT TTCTAACGGA GGTTTTGGTG CACCAGAAAA TTTAGGTCCA GAAATTAATA CCGAAGGAAG AGAAACTTTT CCTTTTATTT CAGATGAAAA CGAACTTTAT TTTGCCAGTG ACGGAAGACC AGGTTTAGGC GGACTGGATA TTTTTGTTTC TAAAATTACC AAAGAATGCA CTTTTGATGA AGTACAAAAT GTTGGTGAAC CAATTAACAG TAAACAAGAC GATTTTGCTT TTATCATTAA CAGTAAAAAC AGAAATGGTT TTTTCTCTTC AAACCGAGTA AACGGCCATG GACTTGACGA TGTATACCGA TTTACAGAAA ACAGAAGATT AATTTGCGAA CAGCAGATAT CCGGAACCAT TACTGATCAG GAAACAAACG AAACACTTTC AAACGTTGCC TTGATTTTAT TTGATGAAGC AGGTAAAACT GCTGTTGAAG CTAAATCAGA TGCCAATGGA AATTATGTTT TTTCGAATGT AAAATGCGGT AAAAAGTACT ATATCAAAAC AGCTAAAGAA GATTATTTGT TTAAAGAAGT TTCGATAACA CTGAAAAAGG CAACAGGATC TGCTTCTCTG CCAATAGCTT TAGAAAAGAA GCCAAAGCCA ATTACAGCAA TTCCGGTTGT AATAAAAACC AATAATTCGA TTAAACCAGT TAAAGTTACC ATTGCAGTTG GAACCGATTT AGGGAAATTA TTAAAAATCC CGATGAACTT TTTTGATTTA GGAAAAGCCA CAATCAAAAA ATCGTCTGTA CCTCAATTGC AAAAAATGGT CGATATGTTA AACCAATATC CAACAATTAA AGTCGATATT CGTTCGCATA CAGACAGCCG TTCATCTTCA GAAAGCAATC AGATTTTATC AGATAAAAGA GCACAGTCTA CCAAAGACTG GCTGGTAAGC AAAGGAATTA ATGCAGACCG ATTAACCGCA AAAGGATTTG GAGAAACACA ATTAGTAAAT AAATGTGCCG ATGGTGTAAA ATGTACAGAA CAACAACATC AGCAAAACCG ACGAAGCGAG TTTATAATCG TAAGTTTGTA A
|
Protein sequence | MKLKKILFPI LLLCFFMADA QTASIKNADK KYDSYAYADA IKAYEKLVEK GVREERIFQR LGNSYYFIGE LKDALKYYQE LFSINENQEA DYLYKYAQCL KSEGNYTKAD EILEKFSQKA PSDKRVVLFL KNRNYLEDIK SNSGRFDIAD AGINSKDSDY GSTILDNKLV FTSARDTGSI IKKNFKWTNK AISTLYAVDL NPDGSIGKPM LFHKQNLQVN FNQSTPVFTK DGKTMYFTRN NSVDGKRKQN ENKVTFLKLY KAVLINNEWK EVQELPFNSD EYSVAHPALS VDEKTLYFAS DMPGTLGLSD IYKVSILSNG GFGAPENLGP EINTEGRETF PFISDENELY FASDGRPGLG GLDIFVSKIT KECTFDEVQN VGEPINSKQD DFAFIINSKN RNGFFSSNRV NGHGLDDVYR FTENRRLICE QQISGTITDQ ETNETLSNVA LILFDEAGKT AVEAKSDANG NYVFSNVKCG KKYYIKTAKE DYLFKEVSIT LKKATGSASL PIALEKKPKP ITAIPVVIKT NNSIKPVKVT IAVGTDLGKL LKIPMNFFDL GKATIKKSSV PQLQKMVDML NQYPTIKVDI RSHTDSRSSS ESNQILSDKR AQSTKDWLVS KGINADRLTA KGFGETQLVN KCADGVKCTE QQHQQNRRSE FIIVSL
|
| |