Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1636 |
Symbol | |
ID | 5090987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1890954 |
End bp | 1892354 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644741045 |
Product | polysulphide reductase, NrfD |
Protein accession | YP_001193987 |
Protein GI | 146299396 |
COG category | [C] Energy production and conversion |
COG ID | [COG5557] Polysulphide reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.513529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCTC ATTACGAAGC ACCCATTAGA AAACCTTTAG TTATAGGTGA TAAATCATAT CACGATGTAA CTGTAGATGT GGCAGCGCCT GTTGAAGGAC CTGCAAATAA ACAATGGTGG ATTGTATTTA CAATCGCATT AGTAGCCTTC CTTTGGGGGT TAGGTTGTAT AATTTACACC GTATCTACCG GTATCGGAAC ATGGGGATTA AACAAAACAG TTGGTTGGGC TTGGGATATT ACTAACTTCG TTTGGTGGGT TGGTATTGGT CACGCTGGAA CTTTGATTTC TGCAGTACTT TTACTTTTCC GTCAGCGTTG GAGAATGGCT ATTAACCGTT CTGCGGAAGC TATGACCATT TTCTCGGTAG TTCAGGCAGG TTTATTTCCA ATCATTCACA TGGGGCGTCC ATGGTTAGCA TACTGGGTTT TACCTATTCC AAATCAATTT GGATCTTTAT GGGTAAACTT TAACTCACCA TTGCTTTGGG ACGTATTCGC GATTTCAACT TATCTTTCAG TATCATTAGT ATTCTGGTGG ACTGGTTTAT TGCCTGATTT CGCTATGCTT CGTGATAGAG CTATTACTCC ATTTAACAAA AGAGTTTATT CTATCCTAAG TTTTGGATGG AGCGGTAGAG CTAAAGATTG GCAGCGTTTT GAAGAAGTAT CTTTAGTATT AGCTGGTTTA GCTACACCTC TTGTACTTTC TGTACACACA ATTGTATCTA TGGACTTTGC TACTTCTGTA ATTCCTGGAT GGCATACAAC AATTTTCCCT CCATACTTCG TTGCTGGAGC GGTTTTCTCA GGATTTGCGA TGGTAAATAC ATTGTTGATC GTTATGAGAA AAGTTTCTAA CCTTGAAGCA TACATTACAT TACAGCATAT CGAGTTAATG AACATCATTA TTATGATTAC TGGTTCTATC GTAGGTGTTG CTTATATCAC TGAGTTATTC GTAGCTTGGT ATTCAGGAGT AGAATATGAG CAATATGCAT TCTTAAACAG AGCTACTGGA CCTTACTGGT GGGCATATTG GTCAATGATG ACATGTAACG TGTTCTCTCC TCAGTTCATG TGGTTCAAAA AATTAAGAAC AAGTATCATG TTCTCATTCA TCATCTCGAT TGTAGTAAAC ATCGGTATGT GGTTTGAAAG ATTCGTAATT ATTGTTACTT CTTTACATAG AGATTACCTT CCATCTTCTT GGACAATGTT CTCACCAACA TTTGTTGATA TTGGAATTTT CATTGGAACA ATTGGTTTCT TCTTTGTATT GTTTTTATTA TACTCTAGAA CATTCCCTGT AATCGCTCAG GCAGAGGTAA AAACAATTTT GAAAGGAACA GGAGATAATT ACATTAGAGA AAGAGCAAAT AAAGATTCAC ATCATGAGTA A
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Protein sequence | MSSHYEAPIR KPLVIGDKSY HDVTVDVAAP VEGPANKQWW IVFTIALVAF LWGLGCIIYT VSTGIGTWGL NKTVGWAWDI TNFVWWVGIG HAGTLISAVL LLFRQRWRMA INRSAEAMTI FSVVQAGLFP IIHMGRPWLA YWVLPIPNQF GSLWVNFNSP LLWDVFAIST YLSVSLVFWW TGLLPDFAML RDRAITPFNK RVYSILSFGW SGRAKDWQRF EEVSLVLAGL ATPLVLSVHT IVSMDFATSV IPGWHTTIFP PYFVAGAVFS GFAMVNTLLI VMRKVSNLEA YITLQHIELM NIIIMITGSI VGVAYITELF VAWYSGVEYE QYAFLNRATG PYWWAYWSMM TCNVFSPQFM WFKKLRTSIM FSFIISIVVN IGMWFERFVI IVTSLHRDYL PSSWTMFSPT FVDIGIFIGT IGFFFVLFLL YSRTFPVIAQ AEVKTILKGT GDNYIRERAN KDSHHE
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