Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1617 |
Symbol | |
ID | 5090968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1865596 |
End bp | 1868445 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644741024 |
Product | DNA polymerase I |
Protein accession | YP_001193968 |
Protein GI | 146299377 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.310116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACTC AAAAACGCCT TTTTCTTCTA GATGCTTATG CATTAATTTT TCGCGGTTAT TATGCCTTTA TAAAAAACCC GAGAATCAAC TCAAAAGGAA TGGATACATC TGCAATTATG GGTTTTATGA ACTCACTTTT AGATGTTATT AAAAGAGAAA AACCAGATCA TTTAGCCGTT GCTTTTGATA AAGAAGGAAG CCGCGCTAGA ACAGAAATGT TTGCCGAATA TAAAGCTAAC CGCGACGAAA CTCCCGAAGC TATTAAAATT GCTGTTCCTT ATATTCAGGA ATTATTAAAA GCAATGCACA TTCCTATTAT TGAACTTGCA GGCTGTGAAG CTGATGATTT AATTGGTACA ATTGCCAAAC AAGCCGAGAA ACAAAACTAC AAGGTATACA TGGTAACACC TGATAAGGAT TTTGCGCAGT TGGTTTCTGA AAATATATTT ATGTACAAAC CTGCCCGAAT GGGTAATGGA ATCGAAATTT GGGGAGTTCC AGAGGTTTTA GCAAAGTTTG AAGTCGAGAG ACCAGAACAG GTTATCGATT TTCTTGGAAT GATGGGTGAC GCCGTAGATA ATATTCCGGG ATTACCTGGA GTTGGTGAAG TAACGGCTAA AAAATTCTTG AAAGAATTTG GTTCAATGGA AAATCTTTTG GCTAATACTG ATAAACTGAA AGGCAAAATG AAAGAAAACA TCGAAGCCAA TAAAGACAAA GGTATTTTAT CTAAAAAACT GGCGGCTATT ATGTGTGACT GCGATGTCGT TTTTAATGAA GATGATTACG AACTTTCTCG TCCGGATATT GAAAAAACCG ATGCTATTTT TCAGGAACTG GAATTTAGAA GAATGGCAGA ACAATTTGAT AATTTGTTTA AAGTTGGCGC AGGAAGTGAA TCAGGATCAA CTCCGGCTCA GGATGCTAAA TTATACAAAA AACCACAGCC AAAGAATGAA GACCAATTTG ATCTTTTTGG CGGAGGCGGC ACCACTCTTG ATGAAAATGC CGAAGCTGCA AGAAATTCAT TTTATAATAC TTTAGAAAAT ACTGAACATT CTTATCAGAC CGTTCAGGGC GATTTAGGAA TTAAATTGCT TTTACAAAAT TTACAAAAAC AAACTTCGGT TTGTTTTGAT ACCGAAACCA CAGGAATTGA TGCTTTGCAT GCAGAACTTG TAGGAATGTC TTTTTCTTAC GAAAAAGGAA AAGCATTTTA TGTTCCGTTT CCGGAAAGTC AGGAAGAAGC AAAAGTTTTG ATTGACAAGT TTGTTCCATT TTTTGAAAAT GAAAACATTG AGAAAATTGG TCAAAATTTA AAATACGATT TAAAAATCCT TTCTAATTAC GGTGTTACTG TAAAAGGAAA ACTTTTTGAC ACGATGATCG CACACTATCT AATTAATCCG GATATGCGTC ATAATATGGA TATTTTAGCC GAAACGTATT TGAAATATTC TCCAAAATCT ATTGAAACTT TAATTGGTAA AAAAGGAAAA AATCAGCTTT CTATGCGCGA TGTTCCTTTA GAAGATATTA AAGAATACGC CGCAGAAGAT GCCGATGTAA CTTTACAATT AAAAGAAATC TTTACAGCCG AATTAGAAAA AACCGAGACC AAAAAGCTGT TTGACGAAAT TGAAATTCCA TTAGTAAGCG TTTTAGCCGA CATGGAAACA GAAGGAATTC GTCTGGATGT TGAGTTCTTA AAACAAATGT CTAAAGAGAT GGACGTTGAA ATCAAATCTT TAGAAGAACA GATATACGAA ACTGCCGGCG AGAAATTCAA TCTGGCTTCT CCAAAACAAT TAGGAGACAT TTTATTTGAT AAACTTAAAA TTGGCGGCGC AAAACAAAAG AAAACCAAAA CAGGTCAATA TGCAACCGGA GAAGAAGTTT TGACTTATTT AGCCAACGAT AATCCAATCG TAAAACAAAT TCTTGATTGG CGTCAAATGG TAAAACTGCA AAGCACTTAT ATTTTAGCTT TACCAGAACA GGTTGACAAA AAGACTTTAC GTGTTCATAC TGATTATATG CAGACGGTTG CCGCAACAGG ACGTTTAAGT TCTAATAATC CAAACTTGCA AAACATTCCA ATTCGTACCG AAAGAGGACG TCAGATTCGT AAAGCTTTTG TAGCGCGCGA TGAAAATTAT ACTTTAATTT CTGCCGATTA CTCTCAAATT GAATTGCGAA TTATTGCAGC CTTAAGCGGT GAAGAAAATA TGATCGCTGC TTTCCAAAAT GGAGAAGATA TTCACCGAGC TACTGCTGCA AAAGTTTTTG ATGTAGCTTT AGAAGAAGTT TCACGCGAGC AAAGAAGTAA TGCTAAAACC GTAAACTTTG GAATTATCTA TGGAGTTTCT GCTTTTGGAT TAAGTAATCA GACTTCACTT TCAAGAAGCG AAAGCGCTGC TTTGATCGAT GCTTATTACA AAACATATCC GCGTCTTAAA TCTTATATCT CAGAACAAGT TGATTTTGCT CGTGAAAAAG GCTACGTACA AACCATTTTA GGCCGCCGTC GTTACTTAAA AGATATTAAT TCTGCGAATG CTGTCGTAAG AAGCGCTGCC GAAAGAAATG CTGTAAATGC TCCAATTCAG GGAAGTGCTG CTGATGTAAT TAAAATTGCG ATGATCAACA TTCACAAAAA ACTTCGCGAA GAAAATTGGA AATCTAAAAT GTTGCTTCAG GTTCATGATG AGCTTGTGTT CGATGTTCAC AATGATGAAC TCGAAAAAAT CCAGCCAATG ATTAAACACG AAATGGAAAA TGCATTTAAA ATGTCTGTTC CTTTAGAAGT TGAACTTGGA TTAGGTAAAG ACTGGTTAGA AGCCCACTAA
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Protein sequence | MSTQKRLFLL DAYALIFRGY YAFIKNPRIN SKGMDTSAIM GFMNSLLDVI KREKPDHLAV AFDKEGSRAR TEMFAEYKAN RDETPEAIKI AVPYIQELLK AMHIPIIELA GCEADDLIGT IAKQAEKQNY KVYMVTPDKD FAQLVSENIF MYKPARMGNG IEIWGVPEVL AKFEVERPEQ VIDFLGMMGD AVDNIPGLPG VGEVTAKKFL KEFGSMENLL ANTDKLKGKM KENIEANKDK GILSKKLAAI MCDCDVVFNE DDYELSRPDI EKTDAIFQEL EFRRMAEQFD NLFKVGAGSE SGSTPAQDAK LYKKPQPKNE DQFDLFGGGG TTLDENAEAA RNSFYNTLEN TEHSYQTVQG DLGIKLLLQN LQKQTSVCFD TETTGIDALH AELVGMSFSY EKGKAFYVPF PESQEEAKVL IDKFVPFFEN ENIEKIGQNL KYDLKILSNY GVTVKGKLFD TMIAHYLINP DMRHNMDILA ETYLKYSPKS IETLIGKKGK NQLSMRDVPL EDIKEYAAED ADVTLQLKEI FTAELEKTET KKLFDEIEIP LVSVLADMET EGIRLDVEFL KQMSKEMDVE IKSLEEQIYE TAGEKFNLAS PKQLGDILFD KLKIGGAKQK KTKTGQYATG EEVLTYLAND NPIVKQILDW RQMVKLQSTY ILALPEQVDK KTLRVHTDYM QTVAATGRLS SNNPNLQNIP IRTERGRQIR KAFVARDENY TLISADYSQI ELRIIAALSG EENMIAAFQN GEDIHRATAA KVFDVALEEV SREQRSNAKT VNFGIIYGVS AFGLSNQTSL SRSESAALID AYYKTYPRLK SYISEQVDFA REKGYVQTIL GRRRYLKDIN SANAVVRSAA ERNAVNAPIQ GSAADVIKIA MINIHKKLRE ENWKSKMLLQ VHDELVFDVH NDELEKIQPM IKHEMENAFK MSVPLEVELG LGKDWLEAH
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