Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1615 |
Symbol | |
ID | 5090966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 1863258 |
End bp | 1864283 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741022 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001193966 |
Protein GI | 146299375 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.820009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCTA AAGCAACTCT AAAACAAATT GCGAAGGAAC TAGGTGTTTC TGTGTCAACG GTGTCTAAAG CACTAAATGA CAGTCCGGAA ATTAGTGAGC AGACGAAGGT GAAGATTAAG GAGTATGCCA AACTCAAAAA TTATAAGCCG AATGTTATTG GTCTGAATTT AAAGAATCGT AAAACCAAAA CCATTGGTGT AATTATACCT AATATATTGA ACTCTTTTTT CGCAAAAGTT TTTAGCGGAA TCGAAAAAGT AGCCGATAAA AAAGGATATA ATGTAATTAC ATGTATTTCT AATGAATCTT TGGAAAAAGA AATTCATACG CTTGAAATGC TGAGCAACGG AACTATCGAC GGATTTATTC TTTCGGTTTC TGAAGAAGCT CAAAAACTGC AAGACTATAA TCATTTCTCT GAAATAATTA ACGATGGAAC ACCAATTGTA ATGTTTGATC GAATTGCAGA TGAAGTAGAC TGCGATAAAG TTGTAGTAGA TGATTTTGAT TCTGCATTAA ATTCAACACA ACATTTAATT AATTTAGGAT GTAAAAACAT TGCTTTAATT TCTTCTGTAG ATAATTTAAG TGTTGGAAAA CTTAGAGCCG ATGGGTATTT AAAAGCTTTA AAAGACAATA ATATTTCAGT TAACGAAAAA ATTATTCTTC GTACTGATTC TGAAGATGAT ATGAAAGCTA AAATTGATTC TATTTTTGAT CATAAAATCG ATGGAATTTT TGCTTTGGAC GAAAATGATT CAGTTGCGGC TTTAAGAGTA AGTTTGAAAA AAGGATATAG AGTGCCGGAA GATATTTCTA TAATTGGTTT TGCAGATGGA ATTCTGGCTT CAAGACGTTT ATCGCCAAGT TTAACAACTG TAAGCCAGCA CGGAATTGAA ATAGGAGAAG TTGCAGCGAA AAGACTAATC CAAAGACTGG AAGAACCGGA AGGCGAAACT TCTGATTACG AAACGATCGT TATCAAAACG AAGCTAAAAG AAAGAGAATC TACAAGAAAA GTATAA
|
Protein sequence | MKAKATLKQI AKELGVSVST VSKALNDSPE ISEQTKVKIK EYAKLKNYKP NVIGLNLKNR KTKTIGVIIP NILNSFFAKV FSGIEKVADK KGYNVITCIS NESLEKEIHT LEMLSNGTID GFILSVSEEA QKLQDYNHFS EIINDGTPIV MFDRIADEVD CDKVVVDDFD SALNSTQHLI NLGCKNIALI SSVDNLSVGK LRADGYLKAL KDNNISVNEK IILRTDSEDD MKAKIDSIFD HKIDGIFALD ENDSVAALRV SLKKGYRVPE DISIIGFADG ILASRRLSPS LTTVSQHGIE IGEVAAKRLI QRLEEPEGET SDYETIVIKT KLKERESTRK V
|
| |