Gene Fjoh_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1615 
Symbol 
ID5090966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1863258 
End bp1864283 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content33% 
IMG OID644741022 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001193966 
Protein GI146299375 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.820009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA AAGCAACTCT AAAACAAATT GCGAAGGAAC TAGGTGTTTC TGTGTCAACG 
GTGTCTAAAG CACTAAATGA CAGTCCGGAA ATTAGTGAGC AGACGAAGGT GAAGATTAAG
GAGTATGCCA AACTCAAAAA TTATAAGCCG AATGTTATTG GTCTGAATTT AAAGAATCGT
AAAACCAAAA CCATTGGTGT AATTATACCT AATATATTGA ACTCTTTTTT CGCAAAAGTT
TTTAGCGGAA TCGAAAAAGT AGCCGATAAA AAAGGATATA ATGTAATTAC ATGTATTTCT
AATGAATCTT TGGAAAAAGA AATTCATACG CTTGAAATGC TGAGCAACGG AACTATCGAC
GGATTTATTC TTTCGGTTTC TGAAGAAGCT CAAAAACTGC AAGACTATAA TCATTTCTCT
GAAATAATTA ACGATGGAAC ACCAATTGTA ATGTTTGATC GAATTGCAGA TGAAGTAGAC
TGCGATAAAG TTGTAGTAGA TGATTTTGAT TCTGCATTAA ATTCAACACA ACATTTAATT
AATTTAGGAT GTAAAAACAT TGCTTTAATT TCTTCTGTAG ATAATTTAAG TGTTGGAAAA
CTTAGAGCCG ATGGGTATTT AAAAGCTTTA AAAGACAATA ATATTTCAGT TAACGAAAAA
ATTATTCTTC GTACTGATTC TGAAGATGAT ATGAAAGCTA AAATTGATTC TATTTTTGAT
CATAAAATCG ATGGAATTTT TGCTTTGGAC GAAAATGATT CAGTTGCGGC TTTAAGAGTA
AGTTTGAAAA AAGGATATAG AGTGCCGGAA GATATTTCTA TAATTGGTTT TGCAGATGGA
ATTCTGGCTT CAAGACGTTT ATCGCCAAGT TTAACAACTG TAAGCCAGCA CGGAATTGAA
ATAGGAGAAG TTGCAGCGAA AAGACTAATC CAAAGACTGG AAGAACCGGA AGGCGAAACT
TCTGATTACG AAACGATCGT TATCAAAACG AAGCTAAAAG AAAGAGAATC TACAAGAAAA
GTATAA
 
Protein sequence
MKAKATLKQI AKELGVSVST VSKALNDSPE ISEQTKVKIK EYAKLKNYKP NVIGLNLKNR 
KTKTIGVIIP NILNSFFAKV FSGIEKVADK KGYNVITCIS NESLEKEIHT LEMLSNGTID
GFILSVSEEA QKLQDYNHFS EIINDGTPIV MFDRIADEVD CDKVVVDDFD SALNSTQHLI
NLGCKNIALI SSVDNLSVGK LRADGYLKAL KDNNISVNEK IILRTDSEDD MKAKIDSIFD
HKIDGIFALD ENDSVAALRV SLKKGYRVPE DISIIGFADG ILASRRLSPS LTTVSQHGIE
IGEVAAKRLI QRLEEPEGET SDYETIVIKT KLKERESTRK V