Gene Fjoh_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1609 
Symbol 
ID5090960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1858344 
End bp1859306 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content35% 
IMG OID644741016 
Producttranslation elongation factor Ts 
Protein accessionYP_001193960 
Protein GI146299369 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00132099 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAA TTACTGCTGC AGACGTAAAT AAATTAAGAC AATCTACAGG TGCCGGAATG 
ATGGACTGTA AAAAAGCTTT AGTTGAAGCT GAAGGAGATT TCGATAAAGC TATCCAAATC
CTTAGAGAAA AAGGACAGAA AGTTGCTGCT AACCGTTCTG ACCGTGAGTC TTCTGAAGGA
GCTGCTGTTT CTTTTATCAA TGCAGACAAC ACTAAAGGAG CTATCATCAC TTTAAACTGT
GAAACTGACT TCGTAGGTAA AAATGAAGCT TTCGTAACTT TAGCTAAAGA TTTAGTTGAA
AGAGCTATCA ACTTCTCTAA TAAAGAAGAA TTCTTAGCTT CTGACTTCAA CGGAATTACT
GTTGCTGAAA AATTAATTGA GCAAACAGGT GTTATCGGTG AGAAAATCGA AATCGGTGGT
TTCGAAATTT TAGAAGGTGC TTTCGTTGGA TCTTATGTTC ACGTGAACAA AATTGCTGCT
TTAACAGCTA TTTCTGCTCC AATTGCTAAT GCTGAGACTT TAACAAAAGA CGTATCTATG
CAAGTTGCTT CTATGGGAGC TGACACATTA TCTTACAAAG ATTTTGATCC AGCTTTTGTT
GAATCTGAAC TTGCTGCTCG TATTGCTGTA ATCGAAAAAG ATAATGAAGA AGCAAAACGT
TTAGGAAAAA CTTTAAAAAA TGTTCCTAAA TACATCTCTT TCTCTCAATT AACTCCTGAA
GTTATCAAAC AAGCTGAAGA AGATGCTAAA GCTGAATTAA AAGCTGAAGG TAAACCAGAG
CAAATCTGGG ACAAAATCCT TCCAGGAAAA GTTCAACGTT TCATTTCTGA CAACACTACT
TTAGATCAAG AAAAAGCTTT ATTAGATCAA AACTTCATCA AAGATGACAG TAAAAAAGTT
GGTGATTACG TTAAAGGATT CAACGTTGAA ATCACAGGTT TCAAAAGAGT TACTTTAGGT
TAA
 
Protein sequence
MSTITAADVN KLRQSTGAGM MDCKKALVEA EGDFDKAIQI LREKGQKVAA NRSDRESSEG 
AAVSFINADN TKGAIITLNC ETDFVGKNEA FVTLAKDLVE RAINFSNKEE FLASDFNGIT
VAEKLIEQTG VIGEKIEIGG FEILEGAFVG SYVHVNKIAA LTAISAPIAN AETLTKDVSM
QVASMGADTL SYKDFDPAFV ESELAARIAV IEKDNEEAKR LGKTLKNVPK YISFSQLTPE
VIKQAEEDAK AELKAEGKPE QIWDKILPGK VQRFISDNTT LDQEKALLDQ NFIKDDSKKV
GDYVKGFNVE ITGFKRVTLG